CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
1200010282
(
Ostreococcus tauri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
1200010282
T290601_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
1200010282
M02362_2.00
Ostreococcus tauri
NVATATTCMNNN
NNNKGAATATBN
PBM
Weirauch et al.(2014)
pTH9450
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.661
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02362_2.00
Myb
51
102
RLRWTPELHAEFLKAVHQLGGLELATPKGIATLMTTSGMTLQHIKSHLQKYR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
1200010282
Myb
55
106
RLRWTPELHAEFLKAVHQLGGLELATPKGIATLMTTSGMTLQHIKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Ostreococcus tauri
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.12.313.1
Ostreococcus RCC809
gw1.12.313.1
I
0.867
OSTLU_26932
Ostreococcus lucimarinus
OSTLU_26932
I
0.762
MDP0000269857
Malus domestica
MDP0000269857
I
0.692
SELMODRAFT_447259
Selaginella moellendorffii
SELMODRAFT_447259
I
0.677
SELMODRAFT_438638
Selaginella moellendorffii
SELMODRAFT_438638
I
0.677
GLYMA12G31020
Glycine max
GLYMA12G31020
I
0.664
GSMUA_Achr9G05030_001
Musa acuminata
GSMUA_Achr9G05030_001
I
0.664
Ca_07058
Cicer arietinum
Ca_07058
I
0.664
MTR_2g086450
Medicago truncatula
MTR_2g086450
I
0.664
GLYMA13G39290
Glycine max
GLYMA13G39290
I
0.664
GLYMA11G18990
Glycine max
GLYMA11G18990
I
0.664