CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_92000008
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pm.C_scaffold_92000008
T290864_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_92000008
Myb
135
180
GRWNTEEHQWFLKGLEMFQGPAWGEIARLIGTRTSTQVRTHAQKFF
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_03306
Phytophthora parasitica
F443_03306
N
0.875
fgenesh_scip_prom.46568.626
Phytophthora kernoviae
fgenesh_scip_prom.46568.626
N
0.875
Physo131388
Phytophthora sojae
Physo131388
N
0.875
PITG_11647
Phytophthora infestans
PITG_11647
N
0.875
fgenesh_scip_prom.28083.3471
Phytophthora lateralis
fgenesh_scip_prom.28083.3471
N
0.863
Phyra73363
Phytophthora ramorum
Phyra73363
N
0.863
maker-pir_contig_407-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_407-fgenesh-gene-0.1
N
0.857
PYU1_G003143
Pythium ultimum
PYU1_G003143
N
0.857
maker-piw_contig_2717-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_2717-fgenesh-gene-0.2
N
0.845
HpaG812416
Hyaloperonospora arabidopsidis
HpaG812416
N
0.804
maker-pve_contig_428-snap-gene-0.6
Pythium vexans
maker-pve_contig_428-snap-gene-0.6
N
0.785
maker-pag1_scaffold_228-fgenesh-gene-0.6
Pythium aphanidermatum
maker-pag1_scaffold_228-fgenesh-gene-0.6
N
0.730
ALNC14_126850
Albugo laibachii
ALNC14_126850
N
0.716