CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT29P04.60.nd
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
LjT29P04.60.nd
T291036_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT29P04.60.nd
Myb
14
61
RGPWTIEEDHKLMNFILNNGIQCWRTVPKLAGLLRCGKSCRLRWINYL
LjT29P04.60.nd
Myb
67
87
RGDFTKMEEDQIIQLHSCLGN
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g041165m.g
Citrus sinensis
orange1.1g041165m.g
N
0.794
29633.m000891
Ricinus communis
29633.m000891
N
0.774
LjSGA_050296.1
Lotus japonicus
LjSGA_050296.1
N
0.675
Si032487m.g
Setaria italica
Si032487m.g
N
0.673
Pavir.Fa00215
Panicum virgatum
Pavir.Fa00215
N
0.666