CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-par_contig_1326-snap-gene-0.5
(
Pythium arrhenomanes
)
Myb/SANT,RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
PF02042 (RWP-RK)
IPR014778
IPR003035
maker-par_contig_1326-snap-gene-0.5
T291891_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000020508
RWP-RK
168
216
HISIDELREHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSL
EPrPR00000020508
Myb
309
354
GGRWTSEEHAAFLHGIRLYGKDWRRVAHVVRTRSAVQTRTHAQKYL
Links
Other
Myb/SANT,RWP-RK
family TFs
Other
Pythium arrhenomanes
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.46568.2035
Phytophthora kernoviae
fgenesh_scip_prom.46568.2035
N
0.958
maker-pir_contig_27-fgenesh-gene-0.10
Pythium irregulare
maker-pir_contig_27-fgenesh-gene-0.10
N
0.958
PYU1_G014072
Pythium ultimum
PYU1_G014072
N
0.958
Physo141522
Phytophthora sojae
Physo141522
N
0.947
fgenesh_scip_prom.28083.9508
Phytophthora lateralis
fgenesh_scip_prom.28083.9508
N
0.947
F443_22790
Phytophthora parasitica
F443_22790
N
0.947
PITG_12426
Phytophthora infestans
PITG_12426
N
0.947
F443_19709
Phytophthora parasitica
F443_19709
N
0.947
Phyra84850
Phytophthora ramorum
Phyra84850
N
0.947
maker-pag1_scaffold_515-snap-gene-0.10
Pythium aphanidermatum
maker-pag1_scaffold_515-snap-gene-0.10
N
0.937
maker-pve_contig_506-snap-gene-0.8
Pythium vexans
maker-pve_contig_506-snap-gene-0.8
N
0.895
estExt_fgenesh1_kg.C_01711
Phytophthora capsici
estExt_fgenesh1_kg.C_01711
N
0.874
ALNC14_106830
Albugo laibachii
ALNC14_106830
N
0.874
ALNC14_121160
Albugo laibachii
ALNC14_121160
N
0.874
SPRG_04083
Saprolegnia parasitica
SPRG_04083
N
0.821