AT5G18037 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT5G18037 T292103_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G18037.1 NAC/NAM 12 71

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.26527s0404 Boechera stricta Bostr.26527s0404 N 0.932
Carubv10003054m.g Capsella rubella Carubv10003054m.g N 0.914