Bo3g066880 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo3g066880 T292360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC025
M02368_2.00 		Arabidopsis thaliana
YACGYAAY
RTTRCGTR		 PBM
Weirauch et al.(2014)
pTH7656 		0.884 0.807
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.873 0.912
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.873 0.912
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g066880.1 NAC/NAM 18 144

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra001597 Brassica rapa Bra001597 I 0.938
Ca_19654 Cicer arietinum Ca_19654 I 0.914
NAC056 Arabidopsis thaliana AT3G15510 I 0.911
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.911
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.911
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.911
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.910
Pm011604 Prunus mume Pm011604 I 0.910
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.907
Bo5g127030 Brassica oleracea Bo5g127030 I 0.906
Bra027237 Brassica rapa Bra027237 I 0.906
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.906
PK08629.1 Cannabis sativa PK08629.1 I 0.906
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.905
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.902
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I 0.899
Cla023771 Citrullus lanatus Cla023771 I 0.895
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.895
GLYMA12G34990 Glycine max GLYMA12G34990 I 0.893
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.893
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.893
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.893
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.893
TCM_031363 Theobroma cacao TCM_031363 I 0.893
Ca_06901 Cicer arietinum Ca_06901 I 0.893
27961.m000091 Ricinus communis 27961.m000091 I 0.893
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.893
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.893
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.893
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.893
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.893
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.893
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.893
Si032676m.g Setaria italica Si032676m.g I 0.892
MDP0000868419 Malus domestica MDP0000868419 I 0.892
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.891
Pm025312 Prunus mume Pm025312 I 0.891
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.891
MDP0000180683 Malus domestica MDP0000180683 I 0.891
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I 0.889
POPTR_0011s12420 Populus trichocarpa POPTR_0011s12420 I 0.889
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.889
PK19059.1 Cannabis sativa PK19059.1 I 0.889
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.888
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.888
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.887
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.887
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.887
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.887
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.886
Cla011948 Citrullus lanatus Cla011948 I 0.886
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.886
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.886
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.886
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.886
Bo01282s010 Brassica oleracea Bo01282s010 I 0.885
Bra027101 Brassica rapa Bra027101 I 0.885
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.885
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.885
NAC025 Arabidopsis thaliana AT1G61110 D 0.884
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.884
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.884
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.884
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.884
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.883
Pm009955 Prunus mume Pm009955 I 0.883
29851.m002359 Ricinus communis 29851.m002359 I 0.883
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.883
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.883
OB07G24770 Oryza brachyantha OB07G24770 I 0.882
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.882
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.881
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.881
TCM_029931 Theobroma cacao TCM_029931 I 0.881
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.881
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.880
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.880
PRUPE_ppa015363mg Prunus persica PRUPE_ppa015363mg N 0.880
Pm030099 Prunus mume Pm030099 N 0.880
MDP0000404409 Malus domestica MDP0000404409 I 0.880
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.879
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.879
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.878
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.878
Bo1g128420 Brassica oleracea Bo1g128420 I 0.877
Bra021114 Brassica rapa Bra021114 I 0.877
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.877
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.876
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.876
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.876
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.876
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.875
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.874
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.874
NAC018 Arabidopsis thaliana AT1G52880 D 0.873
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.873
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.872
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.872
MDP0000802924 Malus domestica MDP0000802924 N 0.871
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.871
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.871
mgf025001m Mimulus guttatus mgf025001m I 0.870