CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g002870
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo5g002870
T292394_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g002870.1
NAC/NAM
1
137
MNKYTFNPPEDELINYYLNNKITENDDPEGTQINEVNICHHEPADLPGLAKIESGHTWYFISPVKKFGKLNRRKRASKTGHWKITGNSCTIKDTDGNPIGLKKFLVFQENKNRRSSTLLPTTAHQHKFTWIIHEFHS
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra033297
Brassica rapa
Bra033297
N
0.994
Bostr.5325s0018
Boechera stricta
Bostr.5325s0018
I
0.982
Bostr.5325s0008
Boechera stricta
Bostr.5325s0008
I
0.981
anac049
Arabidopsis lyrata
Al_scaffold_0001_135
N
0.971
Cagra.1968s0044
Capsella grandiflora
Cagra.1968s0044
N
0.970
Carubv10011623m.g
Capsella rubella
Carubv10011623m.g
N
0.970
anac049
Arabidopsis thaliana
AT3G04430
N
0.961
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.874