Bra012470 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra012470 T292578_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.908 0.600
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.908 0.600
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.899 0.564
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.899 0.564
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.896 0.555
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.896 0.555
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra012470.1-P NAC/NAM 783 916

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g052860 Brassica oleracea Bo7g052860 I 0.996
Bo5g043100 Brassica oleracea Bo5g043100 I 0.988
Bra024733 Brassica rapa Bra024733 I 0.988
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I 0.983
SOG1 Arabidopsis lyrata scaffold_102939.1 I 0.981
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I 0.981
Carubv10009087m.g Capsella rubella Carubv10009087m.g I 0.981
SOG1 Arabidopsis thaliana AT1G25580 I 0.979
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.971
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.969
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.967
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.967
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.967
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.967
Pm029010 Prunus mume Pm029010 I 0.965
PK25812.1 Cannabis sativa PK25812.1 I 0.964
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.962
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.962
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.961
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.961
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.961
TCM_011869 Theobroma cacao TCM_011869 I 0.961
29738.m001046 Ricinus communis 29738.m001046 I 0.961
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.961
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.959
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.959
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.957
Cla020673 Citrullus lanatus Cla020673 I 0.955
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.955
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.954
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.953
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.952
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.945
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.944
mgf012882m Mimulus guttatus mgf012882m I 0.944
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.942
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.941
cassava46297.m1 Manihot esculenta cassava46297.m1 I 0.939
Ca_24772 Cicer arietinum Ca_24772 I 0.936
MDP0000165845 Malus domestica MDP0000165845 I 0.933
MDP0000216205 Malus domestica MDP0000216205 I 0.933
MTR_5g053430 Medicago truncatula MTR_5g053430 I 0.922
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.916
GLYMA10G34730 Glycine max GLYMA10G34730 I 0.915
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I 0.914
OB06G19430 Oryza brachyantha OB06G19430 I 0.913
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.912
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.912
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.912
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.912
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I 0.912
NAC073 Arabidopsis thaliana AT4G28500 D 0.908
Bo1g017410 Brassica oleracea Bo1g017410 I 0.908
Bra011034 Brassica rapa Bra011034 I 0.908
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I 0.908
Carubv10005324m.g Capsella rubella Carubv10005324m.g I 0.908
BGIOSGA018654 Oryza indica BGIOSGA018654 I 0.907
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.907
OBART05G06140 Oryza barthii OBART05G06140 I 0.907
ONIVA05G06750 Oryza nivara ONIVA05G06750 I 0.907
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I 0.907
OS05G0194500 Oryza sativa OS05G0194500 I 0.907
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I 0.907
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I 0.907
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.906
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.906
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.906
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.906
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.906
POPTR_0004s04900 Populus trichocarpa POPTR_0004s04900 I 0.905
Si006639m.g Setaria italica Si006639m.g I 0.905
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.905
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.905
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.904
Bra024197 Brassica rapa Bra024197 I 0.904
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.904
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.904
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I 0.904
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.903
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.903
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.903
SapurV1A.0012s0710 Salix purpurea SapurV1A.0012s0710 I 0.903
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.902
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.902
Si001527m.g Setaria italica Si001527m.g I 0.902
Cla011431 Citrullus lanatus Cla011431 I 0.902
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.902
Lus10013967.g Linum usitatissimum Lus10013967.g I 0.902
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.901
PGSC0003DMG400031753 Solanum tuberosum PGSC0003DMG400031753 I 0.901
Si019444m.g Setaria italica Si019444m.g I 0.901
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.901
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.901
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.901
anac075 Arabidopsis thaliana AT4G29230 D 0.899
Bo7g113170 Brassica oleracea Bo7g113170 I 0.899
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.899
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.899
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.899
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.899
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.899
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.899
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.899
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.899
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.899
TCM_037747 Theobroma cacao TCM_037747 I 0.899
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.899
29912.m005354 Ricinus communis 29912.m005354 I 0.899
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.899
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.899
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.899
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.899
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.899
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.899
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.899
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.899
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.899
PK27085.1 Cannabis sativa PK27085.1 D 0.899
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.898
POPTR_0011s05740 Populus trichocarpa POPTR_0011s05740 I 0.898
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.898
Pm027280 Prunus mume Pm027280 I 0.898
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.898
MDP0000124509 Malus domestica MDP0000124509 I 0.898
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.898
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.898
Bo1g016630 Brassica oleracea Bo1g016630 I 0.897
Bra011090 Brassica rapa Bra011090 I 0.897
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.897
30190.m010767 Ricinus communis 30190.m010767 I 0.897
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.897
NAC010 Arabidopsis thaliana AT1G28470 D 0.896
Bo5g055990 Brassica oleracea Bo5g055990 I 0.896
Bra032910 Brassica rapa Bra032910 I 0.896
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.896
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.896
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.896
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.896
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.896
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.896
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.895
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.895
OB01G15780 Oryza brachyantha OB01G15780 I 0.895
OBART01G05840 Oryza barthii OBART01G05840 I 0.895
OBART06G10240 Oryza barthii OBART06G10240 I 0.895
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.895
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.895
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.895
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.895
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.895
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.895
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.895
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.895
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.895
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.895
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.895
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.895
OS01G0191300 Oryza sativa OS01G0191300 I 0.895
SapurV1A.0032s0620 Salix purpurea SapurV1A.0032s0620 I 0.895
chr3.CM0160.860.nd Lotus japonicus chr3.CM0160.860.nd I 0.895
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I 0.894
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.894
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.894
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.894
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.893
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.893
Lus10015392.g Linum usitatissimum Lus10015392.g I 0.892
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.891
GLYMA13G30800 Glycine max GLYMA13G30800 I 0.890
GLYMA15G08480 Glycine max GLYMA15G08480 I 0.890
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.890
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.889
Lus10018637.g Linum usitatissimum Lus10018637.g I 0.889
Lus10039873.g Linum usitatissimum Lus10039873.g I 0.889
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.888
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.887
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.886
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.886
Ca_02457 Cicer arietinum Ca_02457 I 0.886
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.886
Bo7g047040 Brassica oleracea Bo7g047040 I 0.885
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.885
Cla004701 Citrullus lanatus Cla004701 I 0.885
F775_07518 Aegilops tauschii F775_07518 I 0.884
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.884
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.883
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.883
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.883
MTR_2g014680 Medicago truncatula MTR_2g014680 I 0.883
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.883
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.883
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.883
TCM_029798 Theobroma cacao TCM_029798 I 0.883
Ca_11273 Cicer arietinum Ca_11273 I 0.883
Pm010104 Prunus mume Pm010104 I 0.883
MDP0000276278 Malus domestica MDP0000276278 I 0.883
MDP0000309351 Malus domestica MDP0000309351 I 0.883
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I 0.882
OB05G15600 Oryza brachyantha OB05G15600 I 0.882
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.882
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.882
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.882
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.881
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.881
Aquca_051_00040 Aquilegia coerulea Aquca_051_00040 I 0.881
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I 0.881
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.880
mgf018486m Mimulus guttatus mgf018486m I 0.878
Bo7g113660 Brassica oleracea Bo7g113660 I 0.877
Bra024152 Brassica rapa Bra024152 I 0.877
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.877
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.877
Si024889m.g Setaria italica Si024889m.g I 0.877
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.877
Pm015625 Prunus mume Pm015625 I 0.877
Bra030099 Brassica rapa Bra030099 I 0.875
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.875
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.874
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.874
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.873
Ca_06348 Cicer arietinum Ca_06348 I 0.873
F775_07141 Aegilops tauschii F775_07141 I 0.872
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.872
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I 0.872
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.872
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.872
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.872