CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G07700
(
Glycine max
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GLYMA02G07700
T293003_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB
VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.875
0.812
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.875
0.812
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.872
0.795
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G07700.1
NAC/NAM
10
140
PPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKFDPWELPAKAEFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLPGGGVREHFGVKKALVFYKGRPPKGVKTNWIMHEYRF
Links
Other
NAC/NAM
family TFs
Other
Glycine max
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA16G26740
Glycine max
GLYMA16G26740
I
0.950
GLYMA19G28476
Glycine max
GLYMA19G28476
I
0.923
GLYMA16G04740
Glycine max
GLYMA16G04740
I
0.921
chr1.CM0104.240.nc
Lotus japonicus
chr1.CM0104.240.nc
I
0.916
PRUPE_ppa007445mg
Prunus persica
PRUPE_ppa007445mg
I
0.911
Pm025312
Prunus mume
Pm025312
I
0.911
MDP0000180683
Malus domestica
MDP0000180683
I
0.911
MDP0000404409
Malus domestica
MDP0000404409
I
0.903
Eucgr.A02070
Eucalyptus grandis
Eucgr.A02070
I
0.902
Ca_08257
Cicer arietinum
Ca_08257
N
0.898
MTR_7g085220
Medicago truncatula
MTR_7g085220
N
0.897
PK08629.1
Cannabis sativa
PK08629.1
I
0.887
POPTR_0011s04650
Populus trichocarpa
POPTR_0011s04650
I
0.886
PRUPE_ppa015363mg
Prunus persica
PRUPE_ppa015363mg
N
0.886
Pm030099
Prunus mume
Pm030099
N
0.886
Bo1g152220
Brassica oleracea
Bo1g152220
I
0.884
Bra001597
Brassica rapa
Bra001597
I
0.884
Bra040152
Brassica rapa
Bra040152
I
0.884
F775_14365
Aegilops tauschii
F775_14365
I
0.884
F775_16000
Aegilops tauschii
F775_16000
I
0.884
MLOC_8116
Hordeum vulgare
MLOC_8116
I
0.884
Traes_2AS_09457EDD8
Triticum aestivum
Traes_2AS_09457EDD8
I
0.884
Traes_2DS_5DF921ABB
Triticum aestivum
Traes_2DS_5DF921ABB
I
0.884
Traes_6AS_6F89CC969
Triticum aestivum
Traes_6AS_6F89CC969
I
0.884
Traes_6DS_90A627C3F
Triticum aestivum
Traes_6DS_90A627C3F
I
0.884
Ciclev10020717m.g
Citrus clementina
Ciclev10020717m.g
I
0.884
orange1.1g017665m.g
Citrus sinensis
orange1.1g017665m.g
I
0.884
PGSC0003DMG400019293
Solanum tuberosum
PGSC0003DMG400019293
I
0.883
PRUPE_ppa007577mg
Prunus persica
PRUPE_ppa007577mg
I
0.883
Solyc07g063420.2
Solanum lycopersicum
Solyc07g063420.2
I
0.883
anac047
Vitis vinifera
VIT_08s0007g07670
I
0.883
Pm011604
Prunus mume
Pm011604
I
0.883
Lus10006547.g
Linum usitatissimum
Lus10006547.g
I
0.882
Traes_2BS_58AA829F4
Triticum aestivum
Traes_2BS_58AA829F4
I
0.879
TRAES3BF108700110CFD_g
Triticum aestivum
TRAES3BF108700110CFD_g
I
0.879
MDP0000802924
Malus domestica
MDP0000802924
N
0.878
Bo01282s010
Brassica oleracea
Bo01282s010
I
0.876
Bra027101
Brassica rapa
Bra027101
I
0.876
cassava26728.m1
Manihot esculenta
cassava26728.m1
I
0.876
NAC047
Arabidopsis thaliana
AT3G04070
D
0.875
Bra031949
Brassica rapa
Bra031949
I
0.873
NAC025
Arabidopsis thaliana
AT1G61110
D
0.872
anac025
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000277
I
0.872
Bostr.10040s0089
Boechera stricta
Bostr.10040s0089
I
0.872
Cagra.2213s0001
Capsella grandiflora
Cagra.2213s0001
I
0.872
Carubv10021371m.g
Capsella rubella
Carubv10021371m.g
I
0.872
Thhalv10023591m.g
Eutrema salsugineum
Thhalv10023591m.g
I
0.872
LjSGA_023894.2
Lotus japonicus
LjSGA_023894.2
I
0.872
GRMZM2G312201
Zea mays
GRMZM2G312201
N
0.871
Cla023771
Citrullus lanatus
Cla023771
I
0.871
Cucsa.341790
Cucumis sativus
Cucsa.341790
I
0.871
PK06287.1
Cannabis sativa
PK06287.1
N
0.871