CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr10G12860_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr10G12860_001
T293331_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.872
0.741
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr10P12860_001
NAC/NAM
8
135
PPGFRFHPTDEELIVHYLINRVSSSPCPVPVVAEVDIYKHDPWDLPAKATYGDREWYFFSPRDRKYPNGRRPNRAAASGYWKATGTDKAIHTSSGKNHSIGVKKALVFYKGRPPRGLKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr4G02380_001
Musa acuminata
GSMUA_Achr4G02380_001
I
0.907
GSMUA_Achr3G18010_001
Musa acuminata
GSMUA_Achr3G18010_001
I
0.902
GSMUA_Achr7G21770_001
Musa acuminata
GSMUA_Achr7G21770_001
I
0.898
PGSC0003DMG400019293
Solanum tuberosum
PGSC0003DMG400019293
I
0.891
Solyc07g063420.2
Solanum lycopersicum
Solyc07g063420.2
I
0.891
GLYMA19G28476
Glycine max
GLYMA19G28476
I
0.887
GLYMA16G04740
Glycine max
GLYMA16G04740
I
0.885
PRUPE_ppa007577mg
Prunus persica
PRUPE_ppa007577mg
I
0.885
Pm011604
Prunus mume
Pm011604
I
0.885
MDP0000173636
Malus domestica
MDP0000173636
I
0.885
PK08629.1
Cannabis sativa
PK08629.1
I
0.885
MDP0000120881
Malus domestica
MDP0000120881
I
0.883
OB12G11500
Oryza brachyantha
OB12G11500
I
0.881
Sb05g001580
Sorghum bicolor
Sb05g001580
I
0.881
GLYMA15G07620
Glycine max
GLYMA15G07620
I
0.880
OB11G11210
Oryza brachyantha
OB11G11210
I
0.879
PRUPE_ppa007445mg
Prunus persica
PRUPE_ppa007445mg
I
0.878
Sb08g001940
Sorghum bicolor
Sb08g001940
I
0.878
Pm025312
Prunus mume
Pm025312
I
0.878
cassava42314.valid.m1
Manihot esculenta
cassava42314.valid.m1
I
0.878
MDP0000180683
Malus domestica
MDP0000180683
I
0.878
GSMUA_AchrUn_randomG17360_001
Musa acuminata
GSMUA_AchrUn_randomG17360_001
I
0.877
MDP0000404409
Malus domestica
MDP0000404409
I
0.877
OPUNC11G01330
Oryza punctata
OPUNC11G01330
I
0.876
OPUNC12G01370
Oryza punctata
OPUNC12G01370
I
0.876
Si010410m.g
Setaria italica
Si010410m.g
I
0.876
Eucgr.F01091
Eucalyptus grandis
Eucgr.F01091
I
0.876
MTR_2g093810
Medicago truncatula
MTR_2g093810
I
0.875
POPTR_0011s04650
Populus trichocarpa
POPTR_0011s04650
I
0.874
Si026530m.g
Setaria italica
Si026530m.g
I
0.873
Cla011948
Citrullus lanatus
Cla011948
I
0.873
Cucsa.074600
Cucumis sativus
Cucsa.074600
I
0.873
F775_26965
Aegilops tauschii
F775_26965
I
0.872
MLOC_4747
Hordeum vulgare
MLOC_4747
I
0.872
Traes_5BL_CC18CAD72
Triticum aestivum
Traes_5BL_CC18CAD72
D
0.872
GRMZM2G109627
Zea mays
GRMZM2G109627
I
0.871