CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_AchrUn_randomG11980_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_AchrUn_randomG11980_001
T293482_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.871
0.690
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_AchrUn_randomP11980_001
NAC/NAM
15
141
PPGFRFHPTDEELVLYYLKRKFCGRRVKLPVIGEVDVYKWEPWELPEKSVLKSGDKQWYFFSPRDRKYPNGSRSNRATEFGYWKATGKDRTISQNSKATGNKKTLVYYHGRAPKGERTDWVMHEYTL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G24280_001
Musa acuminata
GSMUA_Achr8G24280_001
N
0.913
Gorai.009G260000
Gossypium raimondii
Gorai.009G260000
I
0.902
TCM_036587
Theobroma cacao
TCM_036587
I
0.895
MDP0000146969
Malus domestica
MDP0000146969
I
0.895
MDP0000169485
Malus domestica
MDP0000169485
I
0.895
cassava22173.valid.m1
Manihot esculenta
cassava22173.valid.m1
I
0.893
Ciclev10005341m.g
Citrus clementina
Ciclev10005341m.g
I
0.892
orange1.1g036998m.g
Citrus sinensis
orange1.1g036998m.g
I
0.892
VIT_18s0001g01820
Vitis vinifera
VIT_18s0001g01820
I
0.888
Aquca_017_00010
Aquilegia coerulea
Aquca_017_00010
N
0.884
Bostr.6758s0078
Boechera stricta
Bostr.6758s0078
I
0.880
TCM_033629
Theobroma cacao
TCM_033629
I
0.879
mg018130m
Mimulus guttatus
mg018130m
I
0.879
Gorai.004G268400
Gossypium raimondii
Gorai.004G268400
I
0.879
Gorai.013G146300
Gossypium raimondii
Gorai.013G146300
I
0.879
gene19716-v1.0-hybrid
Fragaria vesca
gene19716-v1.0-hybrid
I
0.878
Cla013653
Citrullus lanatus
Cla013653
I
0.877
Cucsa.118620
Cucumis sativus
Cucsa.118620
I
0.877
Cagra.1310s0016
Capsella grandiflora
Cagra.1310s0016
I
0.877
Carubv10012163m.g
Capsella rubella
Carubv10012163m.g
I
0.877
Cla016588
Citrullus lanatus
Cla016588
N
0.875
Solyc04g072220.2
Solanum lycopersicum
Solyc04g072220.2
I
0.872
ANAC020
Arabidopsis thaliana
AT1G54330
D
0.871
evm.TU.supercontig_26.135
Carica papaya
evm.TU.supercontig_26.135
I
0.871