CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g086880
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_2g086880
T293753_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES67108
NAC/NAM
19
144
FPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCV
KEH38987
NAC/NAM
19
144
FPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATDCGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCV
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA13G39090
Glycine max
GLYMA13G39090
N
0.973
Ca_07077
Cicer arietinum
Ca_07077
N
0.972
LjT33C23.90.nd
Lotus japonicus
LjT33C23.90.nd
N
0.952
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.937
MDP0000133636
Malus domestica
MDP0000133636
N
0.931
Cla008773
Citrullus lanatus
Cla008773
N
0.922
Cla011239
Citrullus lanatus
Cla011239
N
0.922
Cucsa.185800
Cucumis sativus
Cucsa.185800
N
0.918
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.912
mgf010463m
Mimulus guttatus
mgf010463m
N
0.912
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.904
PK07042.1
Cannabis sativa
PK07042.1
N
0.901
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.892
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.892
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.891
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.888
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.879
VIT_06s0080g00970
Vitis vinifera
VIT_06s0080g00970
N
0.878