CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART12G02170
(
Oryza barthii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OBART12G02170
T294072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G02170.1
NAC/NAM
17
145
PSGYFFVPKPEQLIRDYLNHWITGRPIEELRDIVREADVYGSDPATLTEAHRAYGHDGKSWYFLTVAKWKGGRGGAGTAGRLNRCVEGGGTWHNSQRRRVIEGYGDRQAFEYRAPGNKKTDWLMEEIAS
Links
Other
NAC/NAM
family TFs
Other
Oryza barthii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036664
Oryza indica
BGIOSGA036664
N
0.995
OLONG_021330
Oryza longistaminata
OLONG_021330
N
0.995
ORGLA12G0020700
Oryza glaberrima
ORGLA12G0020700
N
0.995
ORUFI12G02570
Oryza rufipogon
ORUFI12G02570
N
0.994
OS12G0137000
Oryza sativa
OS12G0137000
N
0.994
OMERI12G01160
Oryza meridionalis
OMERI12G01160
N
0.993
ORGLA11G0022300
Oryza glaberrima
ORGLA11G0022300
N
0.992
OMERI12G00770
Oryza meridionalis
OMERI12G00770
N
0.991
BGIOSGA034529
Oryza indica
BGIOSGA034529
N
0.987
OPUNC12G02230
Oryza punctata
OPUNC12G02230
N
0.983
OPUNC11G02270
Oryza punctata
OPUNC11G02270
N
0.981
LPERR12G02290
Leersia perrieri
LPERR12G02290
N
0.954
LPERR11G02180
Leersia perrieri
LPERR11G02180
N
0.932