CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400001223
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400001223
T295094_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400003082
NAC/NAM
19
144
LPGFRFHPTDEELVGFYLRRKVENKRINMELIKHIDIYKYDPWDLPKLVEDKEMYYFCMRGRKYKNSVRPNRVTKSGFWKATGIDKPVYSSTTQCIIIGLKKCLVYYRGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc05g021090.2
Solanum lycopersicum
Solyc05g021090.2
N
0.972
MDP0000216714
Malus domestica
MDP0000216714
I
0.930
POPTR_0001s11660
Populus trichocarpa
POPTR_0001s11660
I
0.913
SapurV1A.0094s0540
Salix purpurea
SapurV1A.0094s0540
I
0.911
Lus10030478.g
Linum usitatissimum
Lus10030478.g
I
0.902
Eucgr.A02028
Eucalyptus grandis
Eucgr.A02028
N
0.881
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.881
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.876
TCM_029321
Theobroma cacao
TCM_029321
I
0.871