CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0016s02780
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0016s02780
T295339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0016s02780.1
NAC/NAM
9
140
PPGFKFVPTEEELINYYLYNKIHGRFHGEDATLIKDYDLYGEEEPWEIFNKFQGHKFGDNGLYFLTTLHKKTTNGIKNMNRSVGTHGGTWHGDGGKEVKSSEGVVIGTKKRFRYHKHGKPVKDGWILLEYGS
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0015s00520
Populus trichocarpa
POPTR_0015s00520
N
0.980
POPTR_0006s02930
Populus trichocarpa
POPTR_0006s02930
N
0.930
Lus10019638.g
Linum usitatissimum
Lus10019638.g
N
0.896
gene27279-v1.0-hybrid
Fragaria vesca
gene27279-v1.0-hybrid
N
0.872