CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0097s00260
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0097s00260
T295365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0097s00260.1
NAC/NAM
9
146
SPGFRFDPTGEQLISYYLARKVHGRLTPEETDMIKVCNILYGEGARPPWEIFKLAGHKVGDDALYFFTTLIKKTRKSGAWRMSRTVGTDGGTWHGDGVEEVTCRLDNREFKGTKRRFRYQNNQRPDQNGCWNLLEYGS
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0097s00220
Populus trichocarpa
POPTR_0097s00220
N
0.997
POPTR_0006s02910
Populus trichocarpa
POPTR_0006s02910
N
0.956
POPTR_0097s00210
Populus trichocarpa
POPTR_0097s00210
N
0.943
POPTR_0097s00280
Populus trichocarpa
POPTR_0097s00280
N
0.884
POPTR_0006s02930
Populus trichocarpa
POPTR_0006s02930
N
0.882