CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.199090
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.199090
T296988_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.199090.1
NAC/NAM
6
132
PPGFRFHPTDEELISYYLTQKLSDSSFTSKAIGVVDLNKNEPWDLPAKATMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGSVGHALVGMKKTLVFYKGRAPRGEKSNWVMHEYRQ
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla019261
Citrullus lanatus
Cla019261
N
0.960
MTR_6g084430
Medicago truncatula
MTR_6g084430
N
0.919
Ca_13012
Cicer arietinum
Ca_13012
N
0.916
GLYMA07G10240
Glycine max
GLYMA07G10240
I
0.908
gene25163-v1.0-hybrid
Fragaria vesca
gene25163-v1.0-hybrid
I
0.905
GLYMA09G31650
Glycine max
GLYMA09G31650
N
0.897
GLYMA05G35090
Glycine max
GLYMA05G35090
N
0.890
GLYMA08G04610
Glycine max
GLYMA08G04610
N
0.890
PRUPE_ppa007839mg
Prunus persica
PRUPE_ppa007839mg
I
0.890