CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0562s0031
(
Capsella grandiflora
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cagra.0562s0031
T297357_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0562s0031.1.p
NAC/NAM
5
136
GEVRCRITDEDIIEGYLRPKVNGEATANPRFMVDNMGEELYTREPWLLPQPTDPILNPHEWFYLGKRNSKYRQAEGVDCEGAWILIQGRTPILSEESGEVIGATMRFRYCFRKKNDKAAMAFSNWFMRQYCL
Links
Other
NAC/NAM
family TFs
Other
Capsella grandiflora
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10018723m.g
Capsella rubella
Carubv10018723m.g
N
0.961
Carubv10019084m.g
Capsella rubella
Carubv10019084m.g
N
0.957
Thhalv10014889m.g
Eutrema salsugineum
Thhalv10014889m.g
N
0.898
AT1G64100
Arabidopsis thaliana
AT1G64100
N
0.885
ANAC027
Arabidopsis thaliana
AT1G64105
N
0.885