CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10008035m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10008035m.g
T297478_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10008035m
NAC/NAM
43
158
IRAEDEVLLSRYLKRMVVNGDSWHQQFIKDVDVFNKNPYEEFDSESPTFVIVKPRTEDCGKTDGCESGCWRIIGRDKLIKSEKTGKVLGFKKILKFCVQRKPREYKRSWVMEEFRL
Carubv10008035m
NAC/NAM
186
334
AKHFSYLPTTKAVPVPANLLLPAYGFKSTYPQMDDESYVLMIPDSEGNSWPSYVTNNVYRLDPWKLVDIHDQMFLNFGTCFFTNGTCGVTDVCDNGYWRILHPDRLVRSKSGEPIGFKKVFQYYETKKQRYVCEGEDHKVTWTIEEYRL
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10022099m.g
Capsella rubella
Carubv10022099m.g
N
0.938
anac024
Arabidopsis thaliana
AT1G60350
N
0.926
anac024
Arabidopsis lyrata
fgenesh2_kg.2__422__AT1G60350.1
N
0.918