CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G227000
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.004G227000
T298069_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G227000.1
NAC/NAM
4
134
VKGFRFHPTDEELIEYLQIKTFNRDSLVQVIAEIPDICEFEPWELPGRSVLQTGDRLWYFMYPPKYKYRNSKLVSRTTLEGYWKITGKARKIVNSETGMEIGNKKTLLFYKGQCNDKIRNNTCWVMHEYEL
Gorai.004G227000.2
NAC/NAM
4
134
VKGFRFHPTDEELIEYLQIKTFNRDSLVQVIAEIPDICEFEPWELPGRSVLQTGDRLWYFMYPPKYKYRNSKLVSRTTLEGYWKITGKARKIVNSETGMEIGNKKTLLFYKGQCNDKIRNNTCWVMHEYEL
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_002839
Theobroma cacao
TCM_002839
N
0.976
TCM_005009
Theobroma cacao
TCM_005009
N
0.923
Gorai.007G114500
Gossypium raimondii
Gorai.007G114500
N
0.890
orange1.1g013027m.g
Citrus sinensis
orange1.1g013027m.g
N
0.873