CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g027074m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g027074m.g
T298673_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g027074m
NAC/NAM
9
117
PIDVDFASTDENLFGSLERMIRGSPLPCNVINDVNPYNHRPSNLPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI
orange1.1g027859m
NAC/NAM
9
117
PIDVDFASTDENLFGSLERMIRGSPLPCNVINDVNPYNHRPSNLPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI
orange1.1g027874m
NAC/NAM
9
117
PIDVDFASTDENLFGSLERMIRGSPLPCNVINDVNPYNHRPSNLPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI
orange1.1g027916m
NAC/NAM
9
117
PIDVDFASTDENLFGSLERMIRGSPLPCNVINDVNPYNHRPSNLPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI
orange1.1g030079m
NAC/NAM
3
83
SILTTIGPQIYLNCNVPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI
orange1.1g031672m
NAC/NAM
9
117
PIDVDFASTDENLFGSLERMIRGSPLPCNVINDVNPYNHRPSNLPDGVWYLVCSKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10001389m.g
Citrus clementina
Ciclev10001389m.g
N
0.951