CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Fa00876
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Fa00876
T298843_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa00876.1.p
NAC/NAM
7
128
PAGFRFFPTDEELITCYLARKAMDASFTSPAIRDVDLYKSEPWDLPCDLQEGYFFCTRGSKYLSGVRARRATRCGYWKSTGKDKAVHGRDGRLVGRRKTLVFYRGRAPRGEKTGWAMHEYAM
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si014973m.g
Setaria italica
Si014973m.g
N
0.936
Pavir.J11705
Panicum virgatum
Pavir.J11705
N
0.922
Sb07g021200
Sorghum bicolor
Sb07g021200
N
0.914
LPERR08G12970
Leersia perrieri
LPERR08G12970
N
0.876