CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Pavir.J04622 *(Panicum virgatum)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Pavir.J04622	T298934_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.J04622.1.p	NAC/NAM	529	657	PPGFRFQPTDEELIVHYLCKRAAAKPCPIPIVAELDIYQFDPWDLPAKGVNGGEGVWYFFSPSTHKYGNSSRPCRAAGSGYWNVVGTDKDIFSSTADGEVLGMYKTLVFYRGRWPRGQKTTWFMKEYRR
Pavir.J04622.2.p	NAC/NAM	502	630	PPGFRFQPTDEELIVHYLCKRAAAKPCPIPIVAELDIYQFDPWDLPAKGVNGGEGVWYFFSPSTHKYGNSSRPCRAAGSGYWNVVGTDKDIFSSTADGEVLGMYKTLVFYRGRWPRGQKTTWFMKEYRR
Pavir.J04622.3.p	NAC/NAM	301	429	PPGFRFQPTDEELIVHYLCKRAAAKPCPIPIVAELDIYQFDPWDLPAKGVNGGEGVWYFFSPSTHKYGNSSRPCRAAGSGYWNVVGTDKDIFSSTADGEVLGMYKTLVFYRGRWPRGQKTTWFMKEYRR
Pavir.J04622.4.p	NAC/NAM	328	456	PPGFRFQPTDEELIVHYLCKRAAAKPCPIPIVAELDIYQFDPWDLPAKGVNGGEGVWYFFSPSTHKYGNSSRPCRAAGSGYWNVVGTDKDIFSSTADGEVLGMYKTLVFYRGRWPRGQKTTWFMKEYRR

Links
Other NAC/NAM family TFs
Other *Panicum virgatum* TFs

1 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action