CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.J05743
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J05743
T298942_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J05743.1.p
NAC/NAM
12
142
PPTFRFRPTQRELIEFYLLPRARGQDPFPGVIIEDDAAGSSLPWDLFERHGLGSEDEAYFLARTGEARKPGARQDRGCDGGVGAWKMQSSAEKGLRVGGERILCRRSNLSLHMGKGKSGGSVGWVMHEYTI
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Bb01144
Panicum virgatum
Pavir.Bb01144
N
0.994
Si019165m.g
Setaria italica
Si019165m.g
N
0.982
Si020131m.g
Setaria italica
Si020131m.g
N
0.982
Pavir.J20075
Panicum virgatum
Pavir.J20075
N
0.980
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.878
Sb08g014060
Sorghum bicolor
Sb08g014060
I
0.877