Thhalv10002300m.g (Eutrema salsugineum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Thhalv10002300m.g T299204_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NTL8
M00975_2.00 		Arabidopsis thaliana
TWNCYYHNNN
NNNDRRGNWA		 PBM
Lindemose et al.(2014)
NTL8 		0.938 0.886
NTL8
M07190_2.00 		Arabidopsis thaliana
NTTNCTTCDHNNNNARGNA
TNCYTNNNNDHGAAGNAAN		 Dap-seq
OMalley et al.(2016)
NTL8_col 		0.938 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002300m NAC/NAM 15 140

Links

Other NAC/NAM family TFs
Other Eutrema salsugineum TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g075560 Brassica oleracea Bo4g075560 I 0.944
Bra012024 Brassica rapa Bra012024 I 0.944
NTL8 Arabidopsis thaliana AT2G27300 D 0.938
Carubv10023568m.g Capsella rubella Carubv10023568m.g I 0.937
Cagra.3125s0012 Capsella grandiflora Cagra.3125s0012 I 0.937
ANAC040 Arabidopsis lyrata fgenesh2_kg.4__689__AT2G27300.1 I 0.914
Bostr.28794s0029 Boechera stricta Bostr.28794s0029 I 0.906
Thhalv10002027m.g Eutrema salsugineum Thhalv10002027m.g I 0.897
Thhalv10002040m.g Eutrema salsugineum Thhalv10002040m.g I 0.889