CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10004105m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10004105m.g
T299205_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004105m
NAC/NAM
10
137
PVGFRFSPTDEELVKYYLRLKINGHDDDVRVIREVDICKWEPWDLPDFSVVKTTDSEWLFFCPLDRKYPSGSRMNRATVAGYWKATGKDRKVKSGNTKIIGVKRTLVFYTGRAPKGSRTCWIMHEYRA
Thhalv10004177m
NAC/NAM
10
137
PVGFRFSPTDEELVKYYLRLKINGHDDDVRVIREVDICKWEPWDLPDFSVVKTTDSEWLFFCPLDRKYPSGSRMNRATVAGYWKATGKDRKVKSGNTKIIGVKRTLVFYTGRAPKGSRTCWIMHEYRA
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10000892m.g
Capsella rubella
Carubv10000892m.g
N
0.966
NAC091
Arabidopsis thaliana
AT5G24590
N
0.965
ANAC091
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001968
N
0.965
Cagra.21346s0001
Capsella grandiflora
Cagra.21346s0001
N
0.965
Bostr.5763s0059
Boechera stricta
Bostr.5763s0059
N
0.955
cassava11768.valid.m1
Manihot esculenta
cassava11768.valid.m1
N
0.903
ANAC062
Arabidopsis lyrata
scaffold_501948.1
I
0.901
Bostr.6864s0295
Boechera stricta
Bostr.6864s0295
I
0.901
Cagra.1838s0033
Capsella grandiflora
Cagra.1838s0033
I
0.901
Carubv10017199m.g
Capsella rubella
Carubv10017199m.g
I
0.901
29764.m000758
Ricinus communis
29764.m000758
N
0.899
Bo8g077840
Brassica oleracea
Bo8g077840
I
0.898
Bra017980
Brassica rapa
Bra017980
I
0.898
Thhalv10010340m.g
Eutrema salsugineum
Thhalv10010340m.g
I
0.893
Bra036520
Brassica rapa
Bra036520
N
0.891
Bra019599
Brassica rapa
Bra019599
I
0.890
Bo9g012590
Brassica oleracea
Bo9g012590
N
0.885
Bra009774
Brassica rapa
Bra009774
N
0.879
Bo7g096710
Brassica oleracea
Bo7g096710
N
0.874