CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04516
(
Verticillium albo atrum
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
VDBG_04516
T300343_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04516T0
NFX
259
276
CPHLCFSDCHAGPCRPCD
VDBG_04516T0
NFX
316
334
CGEHFCEQECHSGLCGSCT
VDBG_04516T0
NFX
397
410
CGHHECQKTCHPQD
VDBG_04516T0
NFX
461
478
CGHECDRTCHVGPCPPCY
VDBG_04516T0
NFX
516
529
CGRHQCGDRCCPGE
VDBG_04516T0
NFX
566
584
CGAHQCQQICHRGPCGSCL
Links
Other
NFX
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_08731
Verticillium dahliae
VDAG_08731
N
1.000
VDBG_04516
Verticillium alfalfae
VDBG_04516
N
1.000