CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003885.1
(
Alligator sinensis
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Alligator_sinensis_CCG003885.1
T300889_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003885.1
NFX
220
237
CGHKCLLLCHPGPCPPCP
Alligator_sinensis_CCG003885.1
NFX
273
291
CGQHSCENPCHPGNCQPCP
Alligator_sinensis_CCG003885.1
NFX
326
344
CGNHTCEQVCHSGSCGECP
Alligator_sinensis_CCG003885.1
NFX
379
397
CGIHKCSQRCHRGPCETCR
Alligator_sinensis_CCG003885.1
NFX
431
449
CQKHQCKRKCCPGNCPPCD
Alligator_sinensis_CCG003885.1
NFX
452
471
CGRTLGCRNHKCPSVCHRGI
Alligator_sinensis_CCG003885.1
NFX
530
547
CGRLLDCQNHTCVKECHR
Alligator_sinensis_CCG003885.1
NFX
579
596
CPHRCILPCHPGECPPCI
Links
Other
NFX
family TFs
Other
Alligator sinensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTSYG00000012106
Tarsius syrichta
ENSTSYG00000012106
N
0.783
ENSPFOG00000007307
Poecilia formosa
ENSPFOG00000007307
N
0.754
NFXL1
Homo sapiens
ENSG00000170448
N
0.715
ENSMMUG00000021780
Macaca mulatta
ENSMMUG00000021780
N
0.715
NFXL1
Callithrix jacchus
ENSCJAG00000018893
N
0.709