CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_400006
(
Volvox carteri
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
estExt_Genewise1Plus.C_400006
T300933_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_400006
NFX
206
223
CGHTCLLLCHPGPCPPCP
estExt_Genewise1Plus.C_400006
NFX
258
275
CGHRCPDVCHPGDCAKCR
estExt_Genewise1Plus.C_400006
NFX
310
328
CGNHKCEKVCHTGACGSCP
estExt_Genewise1Plus.C_400006
NFX
364
383
CGIHRCADRCHQGECTAQCR
estExt_Genewise1Plus.C_400006
NFX
417
435
CGRHPCKRRCCDGNCPPCE
estExt_Genewise1Plus.C_400006
NFX
444
462
CGNHKCPAPCHSGPCRPCP
estExt_Genewise1Plus.C_400006
NFX
509
521
AHRCHYGPCPPCA
estExt_Genewise1Plus.C_400006
NFX
608
619
CGNHRCPLPCHA
estExt_Genewise1Plus.C_400006
NFX
653
676
CGLTRGCSHPCPRRCHQGQCPRCE
estExt_Genewise1Plus.C_400006
NFX
723
743
CTHPCKALCHSGPCPNPEGCS
Links
Other
NFX
family TFs
Other
Volvox carteri
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHLREDRAFT_114109
Chlamydomonas reinhardtii
CHLREDRAFT_114109
N
0.727