CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genemark1.C_40311
(
Coccomyxa subellipsoidea C169
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
estExt_Genemark1.C_40311
T300964_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
65191
NFX
196
213
CGHRCPAICHLGDCKSCS
65191
NFX
238
266
CGRVCGKTLGCDRCNCDRVCHSGSCGECP
65191
NFX
302
321
CGRHHCADRCHPGECSSTCR
65191
NFX
355
373
CGRHACKKRCCDGNHPPCD
65191
NFX
376
400
CGRRLRCDNHTDPSPCHAGACLPCP
65191
NFX
538
552
CGNHTCSRPCHLLGE
65191
NFX
575
592
CGHACLLECHTSDCPPCE
65191
NFX
608
640
SCGKPCYRKLPECPHHCEAICHLSECPASSSCQ
Links
Other
NFX
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshCV_pg.C_40265
Chlorella vulgaris
estExt_fgeneshCV_pg.C_40265
N
0.757