CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g007271m.g
(
Citrus sinensis
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
orange1.1g007271m.g
T300983_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g007271m
NFX
30
48
CGKHVCERGCHVGQCGGCP
orange1.1g007271m
NFX
74
103
CGATCDKMLSCRIHRCHDRCHRGPCIETCR
orange1.1g007271m
NFX
137
155
CGRHACKRRCCNGDCPPCS
orange1.1g007271m
NFX
158
182
CGKRLLCKNHKCPSPCHRGACAPCP
orange1.1g007271m
NFX
210
219
KCRKSCHVIP
orange1.1g007271m
NFX
229
241
PHKCHYGACPPCR
orange1.1g007271m
NFX
250
261
CGHSCKLSCHGP
orange1.1g007271m
NFX
332
343
CGNHYCTKYCHA
orange1.1g007271m
NFX
375
392
CPHSCPLPCHPGECPPCK
orange1.1g009037m
NFX
30
48
CGKHVCERGCHVGQCGGCP
orange1.1g009037m
NFX
74
103
CGATCDKMLSCRIHRCHDRCHRGPCIETCR
orange1.1g009037m
NFX
137
155
CGRHACKRRCCNGDCPPCS
orange1.1g009037m
NFX
158
182
CGKRLLCKNHKCPSPCHRGACAPCP
orange1.1g009037m
NFX
210
219
KCRKSCHVIP
orange1.1g009037m
NFX
229
241
PHKCHYGACPPCR
orange1.1g009037m
NFX
250
261
CGHSCKLSCHGP
orange1.1g009037m
NFX
332
343
CGNHYCTKYCHA
orange1.1g009037m
NFX
375
392
CPHSCPLPCHPGECPPCK
orange1.1g011784m
NFX
4
22
CGRHACKRRCCNGDCPPCS
orange1.1g011784m
NFX
25
49
CGKRLLCKNHKCPSPCHRGACAPCP
orange1.1g011784m
NFX
77
86
KCRKSCHVIP
orange1.1g011784m
NFX
90
108
HRSICKPHKCHYGACPPCR
orange1.1g011784m
NFX
117
128
CGHSCKLSCHGP
orange1.1g011784m
NFX
199
210
CGNHYCTKYCHA
orange1.1g011784m
NFX
241
259
TCPHSCPLPCHPGECPPCK
orange1.1g011809m
NFX
4
22
CGRHACKRRCCNGDCPPCS
orange1.1g011809m
NFX
25
49
CGKRLLCKNHKCPSPCHRGACAPCP
orange1.1g011809m
NFX
77
86
KCRKSCHVIP
orange1.1g011809m
NFX
90
108
HRSICKPHKCHYGACPPCR
orange1.1g011809m
NFX
117
128
CGHSCKLSCHGP
orange1.1g011809m
NFX
199
210
CGNHYCTKYCHA
orange1.1g011809m
NFX
241
259
TCPHSCPLPCHPGECPPCK
orange1.1g011815m
NFX
4
22
CGRHACKRRCCNGDCPPCS
orange1.1g011815m
NFX
25
49
CGKRLLCKNHKCPSPCHRGACAPCP
orange1.1g011815m
NFX
77
86
KCRKSCHVIP
orange1.1g011815m
NFX
90
108
HRSICKPHKCHYGACPPCR
orange1.1g011815m
NFX
117
128
CGHSCKLSCHGP
orange1.1g011815m
NFX
199
210
CGNHYCTKYCHA
orange1.1g011815m
NFX
241
259
TCPHSCPLPCHPGECPPCK
Links
Other
NFX
family TFs
Other
Citrus sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action