CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb00500
(
Panicum virgatum
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Pavir.Eb00500
T300984_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb00500.1.p
NFX
210
228
GCDHTCLLLCHPGPCPPCP
Pavir.Eb00500.1.p
NFX
264
282
CGLHRCPVNCHDGPCPPCA
Pavir.Eb00500.1.p
NFX
317
335
CGKHRCERGCHGGKCGECP
Pavir.Eb00500.1.p
NFX
371
390
CGRHRCPERCHRGPCDETCR
Pavir.Eb00500.1.p
NFX
424
442
CGRHACKRRCCAGDCPPCS
Pavir.Eb00500.1.p
NFX
451
462
CGNHKCLSPCHR
Links
Other
NFX
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_4879
Hordeum vulgare
MLOC_4879
N
0.868
F775_23009
Aegilops tauschii
F775_23009
N
0.764