CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN32787
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN32787
T301881_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-145
M02417_2.00
Caenorhabditis elegans
NDWVYRNN
NNYRBWHN
PBM
Weirauch et al.(2014)
pTH6486
0.858
0.629
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN32787
Nuclear receptor
5
75
KSCLVCKKSSNGMHFGALTCRACAAFFRRATVLKLQYKCKQGNSKCNIDGRGRYVCRQCRLTKCRAIGMNE
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN28390
Caenorhabditis brenneri
CBN28390
I
0.987
nhr-37
Caenorhabditis elegans
WBGene00018412
I
0.982
CRE30900
Caenorhabditis remanei
CRE30900
I
0.978
CBG18980
Caenorhabditis briggsae
CBG18980
I
0.978
CBG23583
Caenorhabditis briggsae
CBG23583
I
0.912
CRE27862
Caenorhabditis remanei
CRE27862
I
0.871
nhr-145
Caenorhabditis elegans
WBGene00012703
D
0.858