CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSCING00000002352 *(Ciona intestinalis)* Nuclear receptor
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00105 (zf-C4)	IPR001628	ENSCING00000002352	T302683_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Pparg M05884_2.00	Mus musculus	HWNTRGGKYANB	VNTRMCCYANWD	SMiLE-seq Isakova et al.(2017) PPARg	0.908	0.629
PPARG M02707_2.00	Homo sapiens	STRGGTCANNDTGACCYANW	WNTRGGTCAHNNTGACCYAS	SELEX Mathelier et al.(2014) MA0066.1	0.908	0.629
PPARG M09278_2.00	Homo sapiens	VWSKRGGKSARAGGKSA	TSMCCTYTSMCCYMSWB	Misc Kulakovskiy et al.(2013) PPARG_HUMAN.H11MO.0.A	0.908	0.629
Pparg M09299_2.00	Mus musculus	HWBTRGGBSARAGGKNA	TNMCCTYTSVCCYAVWD	Misc Kulakovskiy et al.(2013) PPARG_MOUSE.H11MO.0.A	0.908	0.629
Pparg M09612_2.00	Mus musculus	TRGGNCARAGGKCA	TGMCCTYTGNCCYA	Misc Heinz et al.(2010) 3T3L1-Pparg_GSE13511	0.908	0.629
PPARG M11138_2.00	Homo sapiens	NNDRRGGTCAAAGGTCAHVND	HNBDTGACCTTTGACCYYHNN	Transfac Matys et al.(2006) V$PPARG_01	0.908	0.629
PPARG M11139_2.00	Homo sapiens	AWBTRGGTCACNDTGACCTASTT	AASTAGGTCAHNGTGACCYAVWT	Transfac Matys et al.(2006) V$PPARG_02	0.908	0.629
PPARG M11140_2.00	Homo sapiens	WWBHRGGNYAAAGKTCA	TGAMCTTTRNCCYDVWW	Transfac Matys et al.(2006) V$PPARG_03	0.908	0.629
PPARG M11141_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PPARG_Q6	0.908	0.629
PPARD M05581_2.00	Homo sapiens	NRRGGTCAAAGGTCAN	NTGACCTTTGACCYYN	SELEX Yin et al.(2017) PPARD_eDBD_HT-SELEX_1	0.895	0.629
PPARD M05582_2.00	Homo sapiens	HRRGGTCAYGACCYYD	HRRGGTCRTGACCYYD	SELEX Yin et al.(2017) PPARD_eDBD_HT-SELEX_2	0.895	0.629
PPARD M05583_2.00	Homo sapiens	NRRGGTCAAAGGTCRN	NYGACCTTTGACCYYN	SELEX Yin et al.(2017) PPARD_eDBD_Methyl-HT-SELEX_1	0.895	0.629
PPARD M05584_2.00	Homo sapiens	NRRGGTCRCGACCYYN	NRRGGTCGYGACCYYN	SELEX Yin et al.(2017) PPARD_eDBD_Methyl-HT-SELEX_2	0.895	0.629
Eip78C M06427_2.00	Drosophila melanogaster	RGGTCA	TGACCY	B1H Zhu et al.(2011) Eip78C_SANGER_5_FBgn0004865	0.879	0.643
sex-1 M02416_2.00	Caenorhabditis elegans	RAGGTCAH	DTGACCTY	PBM Weirauch et al.(2014) pTH5667	0.876	0.643
CBG17178 M02392_2.00	Caenorhabditis briggsae	RAGGTCAH	DTGACCTY	PBM Weirauch et al.(2014) pTH6634	0.875	0.614
Eip75B M03928_2.00	Drosophila melanogaster	MWVTAGGTCANN	NNTGACCTABWK	SELEX Nitta et al.(2015) Eip75B_1	0.874	0.657
Eip75B M03929_2.00	Drosophila melanogaster	AWNTRGGTCANTRGGTCA	TGACCYANTGACCYANWT	SELEX Nitta et al.(2015) Eip75B_2	0.874	0.657
Eip75B M06416_2.00	Drosophila melanogaster	KWWNTRGGTCA	TGACCYANWWM	B1H Zhu et al.(2011) Eip75B_SANGER_5_FBgn0000568	0.874	0.657
PPARA M09295_2.00	Homo sapiens	NWSTRGGBSARAGGKBA	TVMCCTYTSVCCYASWN	Misc Kulakovskiy et al.(2013) PPARA_HUMAN.H11MO.0.B	0.874	0.614
Ppara M09314_2.00	Mus musculus	HWSTRGGBSARAGGKBA	TVMCCTYTSVCCYASWD	Misc Kulakovskiy et al.(2013) PPARA_MOUSE.H11MO.0.A	0.874	0.614
PPARA M11183_2.00	Homo sapiens	CWRAWCYAGGNCAWAGKTCA	TGAMCTWTGNCCTRGWTYWG	Transfac Matys et al.(2006) V$PPARA_01	0.874	0.614
PPARA M11184_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PPARA_Q6	0.874	0.614
usp M03934_2.00	Drosophila melanogaster	ARRGGTCAAAGGTCA	TGACCTTTGACCYYT	SELEX Nitta et al.(2015) usp_1	0.865	0.557
usp M06426_2.00	Drosophila melanogaster	HRRGGTCAH	DTGACCYYD	B1H Zhu et al.(2011) usp_SANGER_5_FBgn0003964	0.865	0.557
usp M02709_2.00	Drosophila melanogaster	GGGGTCACSN	NSGTGACCCC	SELEX Mathelier et al.(2014) MA0016.1	0.865	0.557
usp M09689_2.00	Drosophila melanogaster	KRGGTCACG	CGTGACCYM	Misc Kulakovskiy et al.(2009) usp	0.865	0.557
usp M11191_2.00	Drosophila melanogaster	GRGGTCAYS	SRTGACCYC	Transfac Matys et al.(2006) I$CF1_01	0.865	0.557
usp M11192_2.00	Drosophila melanogaster	GGGGTCAYS	SRTGACCCC	Transfac Matys et al.(2006) I$CF1_02	0.865	0.557
RARG M02397_2.00	Homo sapiens	VGGTCANN	NNTGACCB	PBM Weirauch et al.(2014) pTH5430	0.862	0.629
Rarg M00810_2.00	Mus musculus	NNVGKTCANN	NNTGAMCBNN	PBM Weirauch et al.(2013) pTH4269	0.862	0.629
RARG M03391_2.00	Homo sapiens	SRGGTCAAAAGGTCAVD	HBTGACCTTTTGACCYS	SELEX Jolma et al.(2013) RARG_1	0.862	0.629
RARG M03392_2.00	Homo sapiens	RAGGTCAHVHWRAGGTCA	TGACCTYWDBDTGACCTY	SELEX Jolma et al.(2013) RARG_2	0.862	0.629
RARG M03393_2.00	Homo sapiens	RRGGTCAHNNRAGGTCA	TGACCTYNNDTGACCYY	SELEX Jolma et al.(2013) RARG_3	0.862	0.629
RARG M03394_2.00	Homo sapiens	GAGGTCAAAAGGTCAY	RTGACCTTTTGACCTC	SELEX Jolma et al.(2013) RARG_4	0.862	0.629
RARG M03395_2.00	Homo sapiens	RAGGTCAABYARRGKTCA	TGAMCYYTRVTTGACCTY	SELEX Jolma et al.(2013) RARG_5	0.862	0.629
RARG M03396_2.00	Homo sapiens	RAGGTCAHBNVRGGTCA	TGACCYBNVDTGACCTY	SELEX Jolma et al.(2013) RARG_6	0.862	0.629
Rarg M03416_2.00	Mus musculus	RRGGTCAAAAGGTCAH	DTGACCTTTTGACCYY	SELEX Jolma et al.(2013) Rarg_1	0.862	0.629
Rarg M03417_2.00	Mus musculus	RAGGTCAWVHAAAGGTCA	TGACCTTTDBWTGACCTY	SELEX Jolma et al.(2013) Rarg_2	0.862	0.629
Rarg M03418_2.00	Mus musculus	AAGGTCAHSARAGGTCA	TGACCTYTSDTGACCTT	SELEX Jolma et al.(2013) Rarg_3	0.862	0.629
RARG M05653_2.00	Homo sapiens	NRGGTCANV	BNTGACCYN	SELEX Yin et al.(2017) RARG_FL_HT-SELEX	0.862	0.629
RARG M05649_2.00	Homo sapiens	DRGGTCAAAAGKTCAN	NTGAMCTTTTGACCYH	SELEX Yin et al.(2017) RARG_eDBD_HT-SELEX_1	0.862	0.629
RARG M05650_2.00	Homo sapiens	RAGGTCATGACCTH	DAGGTCATGACCTY	SELEX Yin et al.(2017) RARG_eDBD_HT-SELEX_2	0.862	0.629
Rarg M05885_2.00	Mus musculus	NRGGTCANDRGKKYA	TRMMCYHNTGACCYN	SMiLE-seq Isakova et al.(2017) RARg	0.862	0.629
RARG M09289_2.00	Homo sapiens	RGGTCAVVVWGNMMNNDV	BHNNKKNCWBBBTGACCY	Misc Kulakovskiy et al.(2013) RARG_HUMAN.H11MO.0.B	0.862	0.629
Rarg M09300_2.00	Mus musculus	RGGTCAVVVWGNMMNNDV	BHNNKKNCWBBBTGACCY	Misc Kulakovskiy et al.(2013) RARG_MOUSE.H11MO.0.C	0.862	0.629
Rarg M09613_2.00	Mus musculus	RGKTCAAGGBCA	TGVCCTTGAMCY	Misc Heinz et al.(2010) ES-RARg_GSE30538	0.862	0.629
RARG M11167_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RARG_Q3	0.862	0.629
RARG M05654_2.00	Homo sapiens	NRGGTCRNV	BNYGACCYN	SELEX Yin et al.(2017) RARG_FL_Methyl-HT-SELEX	0.862	0.629
RARG M05651_2.00	Homo sapiens	DRGGTCAARRGGTCRN	NYGACCYYTTGACCYH	SELEX Yin et al.(2017) RARG_eDBD_Methyl-HT-SELEX_1	0.862	0.629
RARG M05652_2.00	Homo sapiens	DAGKTCRYGACCYY	RRGGTCRYGAMCTH	SELEX Yin et al.(2017) RARG_eDBD_Methyl-HT-SELEX_2	0.862	0.629
Nr2f6 M00811_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Weirauch et al.(2013) pTH2193	0.857	0.557
Nr2f6 M03419_2.00	Mus musculus	RAGGTCAADAGGTCA	TGACCTHTTGACCTY	SELEX Jolma et al.(2013) Nr2f6_1	0.857	0.557
Nr2f6 M03420_2.00	Mus musculus	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) Nr2f6_2	0.857	0.557
Rxra M00181_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Badis et al.(2009) Rxra_1035	0.853	0.557
RXRA M03408_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRA_1	0.853	0.557
RXRA M03409_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRA_2	0.853	0.557
RXRA M03410_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRA_3	0.853	0.557
RXRA M03411_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRA_4	0.853	0.557
Rxra M03421_2.00	Mus musculus	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) Rxra_1	0.853	0.557
Rxra M03422_2.00	Mus musculus	RGGTCATGACCY	RGGTCATGACCY	SELEX Jolma et al.(2013) Rxra_2	0.853	0.557
RXRA M05671_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRA_eDBD_HT-SELEX	0.853	0.557
RXRA M05882_2.00	Homo sapiens	VRGKTBAAAGGTYRH	DYRACCTTTVAMCYB	SMiLE-seq Isakova et al.(2017) RXRa	0.853	0.557
RXRA M07993_2.00	Homo sapiens	NRRGGTCA	TGACCYYN	ChIP-seq Gerstein et al.(2012) H1-hESC_RXRA_HudsonAlpha	0.853	0.557
RXRA M07994_2.00	Homo sapiens	DDNNMRRGGTCANDN	NHNTGACCYYKNNHH	ChIP-seq Gerstein et al.(2012) HepG2_RXRA_HudsonAlpha	0.853	0.557
RXRA M09294_2.00	Homo sapiens	VDDDNDNNVRRRGGKCAVDV	BHBTGMCCYYYBNNHNHHHB	Misc Kulakovskiy et al.(2013) RXRA_HUMAN.H11MO.0.A	0.853	0.557
Rxra M09306_2.00	Mus musculus	DDVNNNNNRAGKTCAAGGYCA	TGRCCTTGAMCTYNNNNNBHH	Misc Kulakovskiy et al.(2013) RXRA_MOUSE.H11MO.0.A	0.853	0.557
RXRA M11182_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RXRA_07	0.853	0.557
RXRA M05672_2.00	Homo sapiens	RRGGTCAAAGGTCAH	DTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRA_eDBD_Methyl-HT-SELEX	0.853	0.557
Rxrb M02402_2.00	Mus musculus	VRGGTCAH	DTGACCYB	PBM Weirauch et al.(2014) pTH2861	0.850	0.571
RXRB M03415_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRB_1	0.850	0.571
Rxrb M03435_2.00	Mus musculus	GRGGTCAAAGGTCA	TGACCTTTGACCYC	SELEX Jolma et al.(2013) Rxrb_1	0.850	0.571
RXRB M05681_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_HT-SELEX_1	0.850	0.571
RXRB M05682_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_HT-SELEX_2	0.850	0.571
RXRB M09297_2.00	Homo sapiens	DSAGGTCASD	HSTGACCTSH	Misc Kulakovskiy et al.(2013) RXRB_HUMAN.H11MO.0.C	0.850	0.571
Rxrb M09330_2.00	Mus musculus	DSAGGTCASD	HSTGACCTSH	Misc Kulakovskiy et al.(2013) RXRB_MOUSE.H11MO.0.C	0.850	0.571
RXRB M05683_2.00	Homo sapiens	RRGGTCAAAGGTCRN	NYGACCTTTGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_Methyl-HT-SELEX_1	0.850	0.571
RXRB M05684_2.00	Homo sapiens	RRGGTCRYGACCYY	RRGGTCRYGACCYY	SELEX Yin et al.(2017) RXRB_eDBD_Methyl-HT-SELEX_2	0.850	0.571
Rxrg M02400_2.00	Mus musculus	VRGGTCAN	NTGACCYB	PBM Weirauch et al.(2014) pTH2880	0.848	0.571
RXRG M03375_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) RXRG_1	0.848	0.571
RXRG M03376_2.00	Homo sapiens	RRGGTCATGACCYY	RRGGTCATGACCYY	SELEX Jolma et al.(2013) RXRG_2	0.848	0.571
RXRG M03377_2.00	Homo sapiens	GRGGTCAAAGGTCA	TGACCTTTGACCYC	SELEX Jolma et al.(2013) RXRG_3	0.848	0.571
RXRG M03378_2.00	Homo sapiens	NRGGTCATGACCYC	GRGGTCATGACCYN	SELEX Jolma et al.(2013) RXRG_4	0.848	0.571
RXRG M02746_2.00	Homo sapiens	GGTCAAAGGTCA	TGACCTTTGACC	SELEX Jolma et al.(2010) RXRG_dimer	0.848	0.571
RXRG M05615_2.00	Homo sapiens	VRGGTCAAAGGTCAN	NTGACCTTTGACCYB	SELEX Yin et al.(2017) RXRG_FL_HT-SELEX_1	0.848	0.571
RXRG M05616_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RXRG_FL_HT-SELEX_2	0.848	0.571
RXRG M05879_2.00	Homo sapiens	RGGTBAARGGTBRND	HNYVACCYTTVACCY	SMiLE-seq Isakova et al.(2017) RXRg	0.848	0.571
RXRG M09280_2.00	Homo sapiens	NGTCAAAGGTCAH	DTGACCTTTGACN	Misc Kulakovskiy et al.(2013) RXRG_HUMAN.H11MO.0.B	0.848	0.571
Rxrg M09305_2.00	Mus musculus	VDDVDNSVNRAGKTCAAGGYCA	TGRCCTTGAMCTYNBSNHBHHB	Misc Kulakovskiy et al.(2013) RXRG_MOUSE.H11MO.0.B	0.848	0.571
RXRG M05617_2.00	Homo sapiens	DRGGTBAARGGTBRN	NYVACCYTTVACCYH	SELEX Yin et al.(2017) RXRG_FL_Methyl-HT-SELEX_1	0.848	0.571
RXRG M05618_2.00	Homo sapiens	VRGGTCAYGACCYB	VRGGTCRTGACCYB	SELEX Yin et al.(2017) RXRG_FL_Methyl-HT-SELEX_2	0.848	0.571
AAEL009588 M02388_2.00	Aedes aegypti	NRGGTCR	YGACCYN	PBM Weirauch et al.(2014) pTH5508	0.839	0.600
Hr46 M02406_2.00	Drosophila melanogaster	NRGGTCAN	NTGACCYN	PBM Weirauch et al.(2014) pTH6142	0.839	0.600
Hr46 M03926_2.00	Drosophila melanogaster	RGGTCAGTRGGTCA	TGACCYACTGACCY	SELEX Nitta et al.(2015) Hr46_1	0.839	0.600
Hr46 M06412_2.00	Drosophila melanogaster	AWKTGGGTYW	WRACCCAMWT	B1H Zhu et al.(2011) Hr46_FlyReg_FBgn0000448	0.839	0.600
Hr46 M06413_2.00	Drosophila melanogaster	HWNBAGGTCA	TGACCTVNWD	B1H Zhu et al.(2011) Hr46_SANGER_5_FBgn0000448	0.839	0.600
O77476_BRUPA M02422_2.00	Brugia pahangi	NRGGTCAN	NTGACCYN	PBM Weirauch et al.(2014) pTH6019	0.836	0.557
Rara M00185_2.00	Mus musculus	NRGGTCAN	NTGACCYN	PBM Badis et al.(2009) Rara_1051	0.836	0.614
RARA M03369_2.00	Homo sapiens	RRAGGTCAWBWRRGGTCA	TGACCYYWVWTGACCTYY	SELEX Jolma et al.(2013) RARA_1	0.836	0.614
RARA M03370_2.00	Homo sapiens	RAGGTCAAAAGGTCAWKB	VMWTGACCTTTTGACCTY	SELEX Jolma et al.(2013) RARA_2	0.836	0.614
RARA M03371_2.00	Homo sapiens	AGGTCAHNYWRAGGTCA	TGACCTYWRNDTGACCT	SELEX Jolma et al.(2013) RARA_3	0.836	0.614
RARA M03372_2.00	Homo sapiens	ARGGTCAAAAGGTCA	TGACCTTTTGACCYT	SELEX Jolma et al.(2013) RARA_4	0.836	0.614
RARA M03373_2.00	Homo sapiens	WRRGGTCAHSHRRGGTCA	TGACCYYDSDTGACCYYW	SELEX Jolma et al.(2013) RARA_5	0.836	0.614
RARA M03374_2.00	Homo sapiens	AGGTCAWNNARAGGTCA	TGACCTYTNNWTGACCT	SELEX Jolma et al.(2013) RARA_6	0.836	0.614
Rara M03432_2.00	Mus musculus	AAAGGTCAHBVRAGGTCA	TGACCTYBVDTGACCTTT	SELEX Jolma et al.(2013) Rara_1	0.836	0.614
Rara M03433_2.00	Mus musculus	AGGTCAHNHAAAGGTCA	TGACCTTTDNDTGACCT	SELEX Jolma et al.(2013) Rara_2	0.836	0.614
Rara M03434_2.00	Mus musculus	RAGGTCAAAAGGTCA	TGACCTTTTGACCTY	SELEX Jolma et al.(2013) Rara_3	0.836	0.614
RARA M05607_2.00	Homo sapiens	NVGGKCANNRGGKCAN	NTGMCCYNNTGMCCBN	SELEX Yin et al.(2017) RARA_eDBD_HT-SELEX_1	0.836	0.614
RARA M05608_2.00	Homo sapiens	NVGGKCAYGNCCBN	NVGGNCRTGMCCBN	SELEX Yin et al.(2017) RARA_eDBD_HT-SELEX_2	0.836	0.614
RARA M05609_2.00	Homo sapiens	NRRGGTCANV	BNTGACCYYN	SELEX Yin et al.(2017) RARA_eDBD_HT-SELEX_3	0.836	0.614
RARA M05878_2.00	Homo sapiens	RAGGTCA	TGACCTY	SMiLE-seq Isakova et al.(2017) RARa	0.836	0.614
RARA M09277_2.00	Homo sapiens	RRRDVDBSNDRAGKTCARGG	CCYTGAMCTYHNSVHBHYYY	Misc Kulakovskiy et al.(2013) RARA_HUMAN.H11MO.0.A	0.836	0.614
Rara M09329_2.00	Mus musculus	RGRTCRDRAGKTCAAGGTCA	TGACCTTGAMCTYHYGAYCY	Misc Kulakovskiy et al.(2013) RARA_MOUSE.H11MO.0.A	0.836	0.614
RARA M11137_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR1B1_Q6	0.836	0.614
RARA M05610_2.00	Homo sapiens	DRGGKCRNDRGGTCRN	NYGACCYHNYGMCCYH	SELEX Yin et al.(2017) RARA_eDBD_Methyl-HT-SELEX_1	0.836	0.614
RARA M05611_2.00	Homo sapiens	NVGGTCAYGMCCYN	NRGGKCRTGACCBN	SELEX Yin et al.(2017) RARA_eDBD_Methyl-HT-SELEX_2	0.836	0.614
RARA M05612_2.00	Homo sapiens	NRAGGTCANN	NNTGACCTYN	SELEX Yin et al.(2017) RARA_eDBD_Methyl-HT-SELEX_3	0.836	0.614
Smp_105090 M02412_2.00	Schistosoma mansoni	RGGTCANN	NNTGACCY	PBM Weirauch et al.(2014) pTH6174	0.835	0.586
Rarb M02401_2.00	Mus musculus	NRRGGTCAHN	NDTGACCYYN	PBM Weirauch et al.(2014) pTH2804	0.833	0.614
RARB M03355_2.00	Homo sapiens	AAAGGTCAARAGGTCA	TGACCTYTTGACCTTT	SELEX Jolma et al.(2013) RARB_1	0.833	0.614
Rarb M03423_2.00	Mus musculus	WAAGGTCAAAAGGTCA	TGACCTTTTGACCTTW	SELEX Jolma et al.(2013) Rarb_1	0.833	0.614
Rarb M03424_2.00	Mus musculus	RRAGGTCANBWRAGGTCA	TGACCTYWVNTGACCTYY	SELEX Jolma et al.(2013) Rarb_2	0.833	0.614
Rarb M03425_2.00	Mus musculus	AGGTCAHVBWRAGGTCA	TGACCTYWVBDTGACCT	SELEX Jolma et al.(2013) Rarb_3	0.833	0.614
RARB M05563_2.00	Homo sapiens	NHAAGGTCAN	NTGACCTTDN	SELEX Yin et al.(2017) RARB_FL_HT-SELEX_1	0.833	0.614
RARB M05564_2.00	Homo sapiens	RRGGTCAARRGGTCAN	NTGACCYYTTGACCYY	SELEX Yin et al.(2017) RARB_FL_HT-SELEX_2	0.833	0.614
RARB M05565_2.00	Homo sapiens	DAGGTCAYGACCYY	RRGGTCRTGACCTH	SELEX Yin et al.(2017) RARB_FL_HT-SELEX_3	0.833	0.614
RARB M11094_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR1B2_Q6	0.833	0.614
RARB M05566_2.00	Homo sapiens	NHRAGGTCAH	DTGACCTYDN	SELEX Yin et al.(2017) RARB_FL_Methyl-HT-SELEX_1	0.833	0.614
RARB M05567_2.00	Homo sapiens	RRGGTCAHRRGGTCAN	NTGACCYYDTGACCYY	SELEX Yin et al.(2017) RARB_FL_Methyl-HT-SELEX_2	0.833	0.614
RARB M05568_2.00	Homo sapiens	RRGGTCAYGACCYY	RRGGTCRTGACCYY	SELEX Yin et al.(2017) RARB_FL_Methyl-HT-SELEX_3	0.833	0.614
Rorc M09324_2.00	Mus musculus	NDAWSTRRGTCA	TGACYYASWTHN	Misc Kulakovskiy et al.(2013) RORG_MOUSE.H11MO.0.B	0.832	0.586
Rorc M09617_2.00	Mus musculus	AWBTRGGTCA	TGACCYAVWT	Misc Heinz et al.(2010) EL4-RORgt.Flag_GSE56019	0.832	0.586
NR2C2 M03407_2.00	Homo sapiens	VRGGTCAAAGGTCA	TGACCTTTGACCYB	SELEX Jolma et al.(2013) NR2C2_1	0.821	0.543
NR2C2 M05669_2.00	Homo sapiens	NRGGTCRN	NYGACCYN	SELEX Yin et al.(2017) NR2C2_eDBD_HT-SELEX	0.821	0.543
NR2C2 M08156_2.00	Homo sapiens	NVRGGTCARAGGKCA	TGMCCTYTGACCYBN	ChIP-seq Mathelier et al.(2014) MA0504.1	0.821	0.543
NR2C2 M07990_2.00	Homo sapiens	WBYRCTTCCGGGKYV	BRMCCCGGAAGYRVW	ChIP-seq Gerstein et al.(2012) HeLa-S3_TR4_UCD	0.821	0.543
NR2C2 M07991_2.00	Homo sapiens	DWBYRCTTCCGGGKY	RMCCCGGAAGYRVWH	ChIP-seq Gerstein et al.(2012) HepG2b_TR4_UCD	0.821	0.543
NR2C2 M07992_2.00	Homo sapiens	WBYRCTTCCGGGKYR	YRMCCCGGAAGYRVW	ChIP-seq Gerstein et al.(2012) K562b_TR4_UCD	0.821	0.543
NR2C2 M08221_2.00	Homo sapiens	DWBYDCTTCCGGGKY	RMCCCGGAAGHRVWH	ChIP-seq Contrino et al.(2012) Mv97	0.821	0.543
NR2C2 M08222_2.00	Homo sapiens	TCARAGGTCA	TGACCTYTGA	ChIP-seq Contrino et al.(2012) Mv98	0.821	0.543
NR2C2 M09292_2.00	Homo sapiens	RBTYMVRGGTCR	YGACCYBKRAVY	Misc Kulakovskiy et al.(2013) NR2C2_HUMAN.H11MO.0.B	0.821	0.543
Nr2c2 M09303_2.00	Mus musculus	RRGKSARAGGKCA	TGMCCTYTSMCYY	Misc Kulakovskiy et al.(2013) NR2C2_MOUSE.H11MO.0.A	0.821	0.543
NR2C2 M09611_2.00	Homo sapiens	RRGGTCARAGGTCA	TGACCTYTGACCYY	Misc Heinz et al.(2010) Hela-TR4_GSE24685	0.821	0.543
NR2C2 M11173_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR2C2_03	0.821	0.543
NR2C2 M11174_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NR2C2_04	0.821	0.543
NR2C2 M11175_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_01	0.821	0.543
NR2C2 M11176_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_03	0.821	0.543
NR2C2 M11177_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_Q2_01	0.821	0.543
NR2C2 M11178_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_Q2	0.821	0.543
NR2C2 M11179_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TR4_Q3	0.821	0.543
NR2C2 M05670_2.00	Homo sapiens	NRGGTCRN	NYGACCYN	SELEX Yin et al.(2017) NR2C2_eDBD_Methyl-HT-SELEX	0.821	0.543
Rorb M00820_2.00	Mus musculus	NRGGTCANN	NNTGACCYN	PBM Weirauch et al.(2013) pTH3469	0.819	0.614
rorb M02404_2.00	Tetraodon nigroviridis	NGAGGTCANN	NNTGACCTCN	PBM Weirauch et al.(2014) pTH6589	0.819	0.614
RORB M05677_2.00	Homo sapiens	DAWNTRGGTYAGTRGGTCAN	NTGACCYACTRACCYANWTH	SELEX Yin et al.(2017) RORB_eDBD_HT-SELEX_1	0.819	0.614
RORB M05678_2.00	Homo sapiens	NAWNKRGGTCAYGACCYMNWTN	NAWNKRGGTCRTGACCYMNWTN	SELEX Yin et al.(2017) RORB_eDBD_HT-SELEX_2	0.819	0.614
RORB M05883_2.00	Homo sapiens	AWNBRGGTCAN	NTGACCYVNWT	SMiLE-seq Isakova et al.(2017) RORb	0.819	0.614
RORB M11187_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORBETA_Q2	0.819	0.614
RORB M05679_2.00	Homo sapiens	DAWBTRGGTYAGTRGGTCRN	NYGACCYACTRACCYAVWTH	SELEX Yin et al.(2017) RORB_eDBD_Methyl-HT-SELEX_1	0.819	0.614
RORB M05680_2.00	Homo sapiens	NAWNKRGGTCAYGACCYMNWTN	NAWNKRGGTCRTGACCYMNWTN	SELEX Yin et al.(2017) RORB_eDBD_Methyl-HT-SELEX_2	0.819	0.614
RORC M02405_2.00	Tetraodon nigroviridis	NGAGGTCANN	NNTGACCTCN	PBM Weirauch et al.(2014) pTH6612	0.813	0.600
Q95WG3_ACRMI M02424_2.00	Acropora millepora	NRAGGTCAN	NTGACCTYN	PBM Weirauch et al.(2014) pTH6144	0.812	0.543
Rora M00819_2.00	Mus musculus	NNRGGTCA	TGACCYNN	PBM Weirauch et al.(2013) pTH3464	0.809	0.600
RORA M03353_2.00	Homo sapiens	NMRAGGTCAAVYYVAGGTCA	TGACCTBRRBTTGACCTYKN	SELEX Jolma et al.(2013) RORA_1	0.809	0.600
RORA M03354_2.00	Homo sapiens	WAWSTRGGTYASTAGGTCA	TGACCTASTRACCYASWTW	SELEX Jolma et al.(2013) RORA_2	0.809	0.600
RORA M02705_2.00	Homo sapiens	WWVDAGGTCA	TGACCTHBWW	SELEX Mathelier et al.(2014) MA0071.1	0.809	0.600
RORA M02706_2.00	Homo sapiens	NDWAWBTAGGTCAN	NTGACCTAVWTWHN	SELEX Mathelier et al.(2014) MA0072.1	0.809	0.600
RORA M09265_2.00	Homo sapiens	VWNDRGGBCARDR	YHYTGVCCYHNWB	Misc Kulakovskiy et al.(2013) RORA_HUMAN.H11MO.0.C	0.809	0.600
Rora M09327_2.00	Mus musculus	VWNDRGGBCARDR	YHYTGVCCYHNWB	Misc Kulakovskiy et al.(2013) RORA_MOUSE.H11MO.0.C	0.809	0.600
RORA M11090_2.00	Homo sapiens	DWWWVDAGGTCAH	DTGACCTHBWWWH	Transfac Matys et al.(2006) V$RORA1_01	0.809	0.600
RORA M11091_2.00	Homo sapiens	DWAWBTAGGTCAN	NTGACCTAVWTWH	Transfac Matys et al.(2006) V$RORA2_01	0.809	0.600
RORA M11092_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORALPHA_Q4	0.809	0.600
RORA M11093_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RORA_Q4	0.809	0.600
RORC M05621_2.00	Homo sapiens	KRGGTCAYGMCCYM	KRGGKCRTGACCYM	SELEX Yin et al.(2017) RORC_eDBD_HT-SELEX_1	0.807	0.586
RORC M05622_2.00	Homo sapiens	NAWNKRGGTYANTRGGTCAN	NTGACCYANTRACCYMNWTN	SELEX Yin et al.(2017) RORC_eDBD_HT-SELEX_2	0.807	0.586
RORC M05880_2.00	Homo sapiens	NDAWNTRGGKCA	TGMCCYANWTHN	SMiLE-seq Isakova et al.(2017) RORc	0.807	0.586
RORC M09282_2.00	Homo sapiens	NDAWSTRRGTCA	TGACYYASWTHN	Misc Kulakovskiy et al.(2013) RORG_HUMAN.H11MO.0.C	0.807	0.586
RORC M05623_2.00	Homo sapiens	TRGGTCAYGACCYA	TRGGTCRTGACCYA	SELEX Yin et al.(2017) RORC_eDBD_Methyl-HT-SELEX_1	0.807	0.586
RORC M05624_2.00	Homo sapiens	NAWNTRGGTYASTAGGTCAN	NTGACCTASTRACCYANWTN	SELEX Yin et al.(2017) RORC_eDBD_Methyl-HT-SELEX_2	0.807	0.586
NR1D1 M05605_2.00	Homo sapiens	NWWNTRGGTYASTRGGTCAN	NTGACCYASTRACCYANWWN	SELEX Yin et al.(2017) NR1D1_eDBD_HT-SELEX	0.803	0.657
NR1D1 M09276_2.00	Homo sapiens	DRVNMASTGGGNCANDNDN	NHNHNTGNCCCASTKNBYH	Misc Kulakovskiy et al.(2013) NR1D1_HUMAN.H11MO.0.B	0.803	0.657
Nr1d1 M09310_2.00	Mus musculus	DRVNMASTGGGNCANDNDN	NHNHNTGNCCCASTKNBYH	Misc Kulakovskiy et al.(2013) NR1D1_MOUSE.H11MO.0.A	0.803	0.657
NR1D1 M11136_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$REVERBALPHA_Q6	0.803	0.657
NR1D1 M05606_2.00	Homo sapiens	NAWNKRGGTYAGTRGGTCRN	NYGACCYACTRACCYMNWTN	SELEX Yin et al.(2017) NR1D1_eDBD_Methyl-HT-SELEX	0.803	0.657
Hr4 M06435_2.00	Drosophila melanogaster	AAGGTCA	TGACCTT	B1H Zhu et al.(2011) Hr4_SANGER_5_FBgn0023546	0.796	0.529
NR1D2 M05659_2.00	Homo sapiens	DWWNKRKGTYANTRKGTYRN	NYRACMYANTRACMYMNWWH	SELEX Yin et al.(2017) NR1D2_eDBD_HT-SELEX	0.789	0.643
Nr1d2 M09313_2.00	Mus musculus	NVRDVWVTRRGTCANDVDN	NHBHNTGACYYABWBHYBN	Misc Kulakovskiy et al.(2013) NR1D2_MOUSE.H11MO.0.A	0.789	0.643
NR1D2 M05660_2.00	Homo sapiens	NWWNBRGGKYAVTRGGKCRN	NYGMCCYABTRMCCYVNWWN	SELEX Yin et al.(2017) NR1D2_eDBD_Methyl-HT-SELEX	0.789	0.643
Nr2f2 M00184_2.00	Mus musculus	RRGGTCAN	NTGACCYY	PBM Badis et al.(2009) Nr2f2_2192	0.784	0.514
NR2F2 M08157_2.00	Homo sapiens	NNAAGGTCANN	NNTGACCTTNN	ChIP-seq Mathelier et al.(2014) MA1111.1	0.784	0.514
NR2F2 M08223_2.00	Homo sapiens	AAAGGTCA	TGACCTTT	ChIP-seq Contrino et al.(2012) Mv102	0.784	0.514
NR2F2 M08224_2.00	Homo sapiens	GGKCARAGGB	VCCTYTGMCC	ChIP-seq Contrino et al.(2012) Mv104	0.784	0.514
NR2F2 M09293_2.00	Homo sapiens	NARRGGTCADRDN	NHYHTGACCYYTN	Misc Kulakovskiy et al.(2013) COT2_HUMAN.H11MO.0.A	0.784	0.514
Nr2f2 M09325_2.00	Mus musculus	NNHRAGGTCANVD	HBNTGACCTYDNN	Misc Kulakovskiy et al.(2013) COT2_MOUSE.H11MO.0.A	0.784	0.514
NR2F2 M11180_2.00	Homo sapiens	WRRKKTCAARGGYTCA	TGARCCYTTGAMMYYW	Transfac Matys et al.(2006) V$ARP1_01	0.784	0.514
NR2F2 M11181_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$COUPTF2_Q6	0.784	0.514
Nr2c1 M00812_2.00	Mus musculus	NRRGGTCANN	NNTGACCYYN	PBM Weirauch et al.(2013) pTH1284	0.781	0.514
Nr2c1 M02399_2.00	Mus musculus	RRGGTCAH	DTGACCYY	PBM Weirauch et al.(2014) pTH3466	0.781	0.514
NR2C1 M05597_2.00	Homo sapiens	NRGKKCRYGAMMYN	NRKKTCRYGMMCYN	SELEX Yin et al.(2017) NR2C1_eDBD_HT-SELEX_1	0.781	0.514
NR2C1 M05598_2.00	Homo sapiens	NRRGGTCAN	NTGACCYYN	SELEX Yin et al.(2017) NR2C1_eDBD_HT-SELEX_2	0.781	0.514
NR2C1 M09273_2.00	Homo sapiens	RBYVRVAGGTCAB	VTGACCTBYBRVY	Misc Kulakovskiy et al.(2013) NR2C1_HUMAN.H11MO.0.C	0.781	0.514
Nr2c1 M09304_2.00	Mus musculus	RBYVRVAGGTCAB	VTGACCTBYBRVY	Misc Kulakovskiy et al.(2013) NR2C1_MOUSE.H11MO.0.C	0.781	0.514
NR2C1 M05599_2.00	Homo sapiens	NRRGGTCAN	NTGACCYYN	SELEX Yin et al.(2017) NR2C1_eDBD_Methyl-HT-SELEX_1	0.781	0.514
NR2C1 M05600_2.00	Homo sapiens	RRGGTCRYGACCYY	RRGGTCRYGACCYY	SELEX Yin et al.(2017) NR2C1_eDBD_Methyl-HT-SELEX_2	0.781	0.514
nr2f2 M02393_2.00	Danio rerio	NNRGGTCAN	NTGACCYNN	PBM Weirauch et al.(2014) pTH5882	0.780	0.514
Nr2f1 M00822_2.00	Mus musculus	DRGGTCRN	NYGACCYH	PBM Weirauch et al.(2013) pTH3811	0.780	0.514
NR2F1 M03403_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Jolma et al.(2013) NR2F1_1	0.780	0.514
NR2F1 M03404_2.00	Homo sapiens	RRGGTCAARAGGTCAN	NTGACCTYTTGACCYY	SELEX Jolma et al.(2013) NR2F1_2	0.780	0.514
NR2F1 M03405_2.00	Homo sapiens	RRGGTCAN	NTGACCYY	SELEX Jolma et al.(2013) NR2F1_3	0.780	0.514
NR2F1 M03406_2.00	Homo sapiens	NHRRGGTCANVNG	CNBNTGACCYYDN	SELEX Jolma et al.(2013) NR2F1_4	0.780	0.514
NR2F1 M05661_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_HT-SELEX_1	0.780	0.514
NR2F1 M05662_2.00	Homo sapiens	VRGGTCANYGACCYY	RRGGTCRNTGACCYB	SELEX Yin et al.(2017) NR2F1_eDBD_HT-SELEX_2	0.780	0.514
NR2F1 M05665_2.00	Homo sapiens	VRGGTCAAAGGTCAN	NTGACCTTTGACCYB	SELEX Yin et al.(2017) NR2F1_FL_HT-SELEX_1	0.780	0.514
NR2F1 M05666_2.00	Homo sapiens	RRGGTCANYGACCYY	RRGGTCRNTGACCYY	SELEX Yin et al.(2017) NR2F1_FL_HT-SELEX_2	0.780	0.514
NR2F1 M09291_2.00	Homo sapiens	NRRRBSRRRGGKCANVN	NBNTGMCCYYYSVYYYN	Misc Kulakovskiy et al.(2013) COT1_HUMAN.H11MO.0.C	0.780	0.514
Nr2f1 M09334_2.00	Mus musculus	YARAGGTCA	TGACCTYTR	Misc Kulakovskiy et al.(2013) COT1_MOUSE.H11MO.0.B	0.780	0.514
NR2F1 M11172_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$COUPTF1_Q6_01	0.780	0.514
NR2F1 M05663_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_Methyl-HT-SELEX_1	0.780	0.514
NR2F1 M05664_2.00	Homo sapiens	NRGGTCANYGACCYH	DRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F1_eDBD_Methyl-HT-SELEX_2	0.780	0.514
NR2F1 M05667_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) NR2F1_FL_Methyl-HT-SELEX_1	0.780	0.514
NR2F1 M05668_2.00	Homo sapiens	RRGGTCRNYGACCYY	RRGGTCRNYGACCYY	SELEX Yin et al.(2017) NR2F1_FL_Methyl-HT-SELEX_2	0.780	0.514
NR2F6 M02396_2.00	Homo sapiens	NNRGGTCR	YGACCYNN	PBM Weirauch et al.(2014) pTH6747	0.780	0.543
NR2F6 M03386_2.00	Homo sapiens	RRGGTCAAAAGGTCA	TGACCTTTTGACCYY	SELEX Jolma et al.(2013) NR2F6_1	0.780	0.543
NR2F6 M03387_2.00	Homo sapiens	RRGGTCAAAGGTCA	TGACCTTTGACCYY	SELEX Jolma et al.(2013) NR2F6_2	0.780	0.543
NR2F6 M03388_2.00	Homo sapiens	NRGGTCAAAGGTCA	TGACCTTTGACCYN	SELEX Jolma et al.(2013) NR2F6_3	0.780	0.543
NR2F6 M05641_2.00	Homo sapiens	RRGGTCAAAGGTCAN	NTGACCTTTGACCYY	SELEX Yin et al.(2017) NR2F6_eDBD_HT-SELEX_1	0.780	0.543
NR2F6 M05642_2.00	Homo sapiens	RAGGTCANTGACCTY	RAGGTCANTGACCTY	SELEX Yin et al.(2017) NR2F6_eDBD_HT-SELEX_2	0.780	0.543
NR2F6 M05645_2.00	Homo sapiens	NRGGTCARAGGTCRN	NYGACCTYTGACCYN	SELEX Yin et al.(2017) NR2F6_FL_HT-SELEX_1	0.780	0.543
NR2F6 M05646_2.00	Homo sapiens	NRGGTCANYGACCYY	RRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F6_FL_HT-SELEX_2	0.780	0.543
NR2F6 M11153_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EAR2_Q2	0.780	0.543
NR2F6 M11154_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EAR2_Q4	0.780	0.543
NR2F6 M05643_2.00	Homo sapiens	RRGGTCAAAGGTCRN	NYGACCTTTGACCYY	SELEX Yin et al.(2017) NR2F6_eDBD_Methyl-HT-SELEX_1	0.780	0.543
NR2F6 M05644_2.00	Homo sapiens	RRGGTCRNYGACCYY	RRGGTCRNYGACCYY	SELEX Yin et al.(2017) NR2F6_eDBD_Methyl-HT-SELEX_2	0.780	0.543
NR2F6 M05647_2.00	Homo sapiens	NRGGTYADRGGKBRN	NYVMCCYHTRACCYN	SELEX Yin et al.(2017) NR2F6_FL_Methyl-HT-SELEX_1	0.780	0.543
NR2F6 M05648_2.00	Homo sapiens	NRGGTCANYGACCYN	NRGGTCRNTGACCYN	SELEX Yin et al.(2017) NR2F6_FL_Methyl-HT-SELEX_2	0.780	0.543
THRA M03368_2.00	Homo sapiens	DTGACCTYATVAGGTCAH	DTGACCTBATRAGGTCAH	SELEX Jolma et al.(2013) THRA_1	0.767	0.571
THRA M09275_2.00	Homo sapiens	RGKWSDNNYVAGGWSAN	NTSWCCTBRNNHSWMCY	Misc Kulakovskiy et al.(2013) THA_HUMAN.H11MO.0.C	0.767	0.571
Thra M09333_2.00	Mus musculus	VRGGKCANNYVRGGHCA	TGDCCYBRNNTGMCCYB	Misc Kulakovskiy et al.(2013) THA_MOUSE.H11MO.0.C	0.767	0.571
Thra M09619_2.00	Mus musculus	GGKCANNYVRGGHCA	TGDCCYBRNNTGMCC	Misc Heinz et al.(2010) C17.2-THRa_GSE38347	0.767	0.571
THRA M11135_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$T3RALPHA_Q6	0.767	0.571
GAG_AVIER M11193_2.00	Avian erythroblastosis virus	VHNTRAGGTCACSSNN	NNSSGTGACCTYANDB	Transfac Matys et al.(2006) V$T3R_01	0.764	0.557
Hr78 M06430_2.00	Drosophila melanogaster	HVAGGTCA	TGACCTBD	B1H Zhu et al.(2011) Hr78_SANGER_5_FBgn0015239	0.761	0.529
THRB M03379_2.00	Homo sapiens	DTGACCTBATVAGGTCAN	NTGACCTBATVAGGTCAH	SELEX Jolma et al.(2013) THRB_1	0.760	0.557
THRB M03380_2.00	Homo sapiens	DTGACCTBANTRAGGTCAH	DTGACCTYANTVAGGTCAH	SELEX Jolma et al.(2013) THRB_2	0.760	0.557
THRB M03381_2.00	Homo sapiens	NTGWCCTYADNTRAGGTCAH	DTGACCTYANHTRAGGWCAN	SELEX Jolma et al.(2013) THRB_3	0.760	0.557
THRB M05629_2.00	Homo sapiens	NRGGTCAAAGGTCRN	NYGACCTTTGACCYN	SELEX Yin et al.(2017) THRB_eDBD_HT-SELEX_1	0.760	0.557
THRB M05630_2.00	Homo sapiens	NRRGGTCAYGACCYYN	NRRGGTCRTGACCYYN	SELEX Yin et al.(2017) THRB_eDBD_HT-SELEX_2	0.760	0.557
THRB M05633_2.00	Homo sapiens	NTGWCCTBRNYVAGGWCAN	NTGWCCTBRNYVAGGWCAN	SELEX Yin et al.(2017) THRB_FL_HT-SELEX_1	0.760	0.557
THRB M05634_2.00	Homo sapiens	TRAGGTCABVYVAGGTCAH	DTGACCTBRBVTGACCTYA	SELEX Yin et al.(2017) THRB_FL_HT-SELEX_2	0.760	0.557
THRB M09285_2.00	Homo sapiens	VRVSYVABVKSAGGWCA	TGWCCTSMBVTBRSBYB	Misc Kulakovskiy et al.(2013) THB_HUMAN.H11MO.0.C	0.760	0.557
THRB M11150_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$T3RBETA_Q6_01	0.760	0.557
THRB M05631_2.00	Homo sapiens	NRGGTYRDRGGKYRN	NYRMCCYHYRACCYN	SELEX Yin et al.(2017) THRB_eDBD_Methyl-HT-SELEX_1	0.760	0.557
THRB M05632_2.00	Homo sapiens	NNRGGTCAYGACCYBN	NVRGGTCRTGACCYNN	SELEX Yin et al.(2017) THRB_eDBD_Methyl-HT-SELEX_2	0.760	0.557
THRB M05635_2.00	Homo sapiens	NTGWCCTBRNYVAGGWCAN	NTGWCCTBRNYVAGGWCAN	SELEX Yin et al.(2017) THRB_FL_Methyl-HT-SELEX_1	0.760	0.557
THRB M05636_2.00	Homo sapiens	YRAGGWCAYGYRAGGWCAH	DTGWCCTYRCRTGWCCTYR	SELEX Yin et al.(2017) THRB_FL_Methyl-HT-SELEX_2	0.760	0.557
Q969A9_BOMMO M02410_2.00	Bombyx mori	VRGGTCDN	NHGACCYB	PBM Weirauch et al.(2014) pTH5516	0.752	0.514
svp M06423_2.00	Drosophila melanogaster	ARGGTCA	TGACCYK	B1H Zhu et al.(2011) svp_SANGER_5_FBgn0003651	0.751	0.514
For this family, TFs with SR scores > 0.745* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSCINP00000004784	Nuclear receptor	45	115	MPCKVCGDKSSGVHYGVYSCEGCKGFFRRTIHQKIKYRSCILDRTCSITKINRNRCQTCRFMKCLYVGMSK

Links
Other Nuclear receptor family TFs
Other *Ciona intestinalis* TFs

2182 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSCSAVG00000005587	Ciona savignyi	ENSCSAVG00000005587	I	0.988
nRc.2.0.1.g05607	Romanomermis culicivorax	nRc.2.0.1.g05607	I	0.947
SMUV_0001016301	Syphacia muris	SMUV_0001016301	I	0.936
ASU_12959	Ascaris suum	ASU_12959	I	0.935
D918_00971	Trichuris suis	D918_00971	I	0.926
TMUE_s0022010900	Trichuris muris	TMUE_s0022010900	I	0.926
TTRE_0000231701	Trichuris trichiura	TTRE_0000231701	I	0.926
SNAPOd2T00001986001	Oikopleura dioica	SNAPOd2T00001986001	I	0.922
TMUE_s0091003400	Trichuris muris	TMUE_s0091003400	I	0.922
PPARD	Echinops telfairi	ENSETEG00000011131	I	0.920
SPU_019332	Strongylocentrotus purpuratus	SPU_019332	I	0.919
D918_00942	Trichuris suis	D918_00942	I	0.916
CAC34402	Xenopus laevis	CAC34402	I	0.915
pparg.L	Xenopus laevis	XB-GENE-483140	I	0.915
TTRE_0000500401	Trichuris trichiura	TTRE_0000500401	I	0.915
BGLB004656	Biomphalaria glabrata	BGLB004656	I	0.914
ENSAMXG00000005770	Astyanax mexicanus	ENSAMXG00000005770	I	0.910
pparg	Danio rerio	ENSDARG00000031848	I	0.910
pparg	Gasterosteus aculeatus	ENSGACG00000001665	I	0.910
ENSGMOG00000001375	Gadus morhua	ENSGMOG00000001375	I	0.910
ENSLACG00000009212	Latimeria chalumnae	ENSLACG00000009212	I	0.910
ENSLOCG00000013954	Lepisosteus oculatus	ENSLOCG00000013954	I	0.910
ENSONIG00000014331	Oreochromis niloticus	ENSONIG00000014331	I	0.910
pparg	Oryzias latipes	ENSORLG00000004432	I	0.910
ENSPFOG00000013138	Poecilia formosa	ENSPFOG00000013138	I	0.910
pparg	Tetraodon nigroviridis	ENSTNIG00000014805	I	0.910
pparg	Takifugu rubripes	ENSTRUG00000015522	I	0.910
ENSXMAG00000017330	Xiphophorus maculatus	ENSXMAG00000017330	I	0.910
LotgiG238472	Lottia gigantea	LotgiG238472	I	0.909
PPARG	Anolis carolinensis	ENSACAG00000013360	I	0.908
ENSAMEG00000004774	Ailuropoda melanoleuca	ENSAMEG00000004774	I	0.908
ENSAPLG00000009031	Anas platyrhynchos	ENSAPLG00000009031	I	0.908
PPARG	Bos taurus	ENSBTAG00000001333	I	0.908
PPARG	Canis familiaris	ENSCAFG00000004991	I	0.908
PPARG	Choloepus hoffmanni	ENSCHOG00000007152	I	0.908
PPARG	Callithrix jacchus	ENSCJAG00000016687	I	0.908
PPARG	Cavia porcellus	ENSCPOG00000002043	I	0.908
ENSCSAG00000009839	Chlorocebus sabaeus	ENSCSAG00000009839	I	0.908
PPARG	Dasypus novemcinctus	ENSDNOG00000018641	I	0.908
PPARG	Equus caballus	ENSECAG00000016664	I	0.908
PPARG	Erinaceus europaeus	ENSEEUG00000006334	I	0.908
PPARG	Echinops telfairi	ENSETEG00000001775	I	0.908
ENSFALG00000000011	Ficedula albicollis	ENSFALG00000000011	I	0.908
PPARG	Felis catus	ENSFCAG00000006231	I	0.908
PPARG	Homo sapiens	ENSG00000132170	D	0.908
PPARG	Gallus gallus	ENSGALG00000004974	I	0.908
PPARG	Gorilla gorilla	ENSGGOG00000013117	I	0.908
PPARG	Loxodonta africana	ENSLAFG00000030870	I	0.908
ENSMEUG00000007824	Macropus eugenii	ENSMEUG00000007824	I	0.908
PPARG	Meleagris gallopavo	ENSMGAG00000004981	I	0.908
PPARG	Myotis lucifugus	ENSMLUG00000017638	I	0.908
PPARG	Macaca mulatta	ENSMMUG00000007191	I	0.908
PPARG	Monodelphis domestica	ENSMODG00000006233	I	0.908
ENSMPUG00000017181	Mustela putorius furo	ENSMPUG00000017181	I	0.908
Pparg	Mus musculus	ENSMUSG00000000440	D	0.908
ENSNLEG00000004650	Nomascus leucogenys	ENSNLEG00000004650	I	0.908
ENSOANG00000022445	Ornithorhynchus anatinus	ENSOANG00000022445	I	0.908
ENSOARG00000016452	Ovis aries	ENSOARG00000016452	I	0.908
PPARG	Oryctolagus cuniculus	ENSOCUG00000013194	I	0.908
PPARG	Otolemur garnettii	ENSOGAG00000002971	I	0.908
PPARG	Ochotona princeps	ENSOPRG00000003439	I	0.908
ENSPANG00000016461	Papio anubis	ENSPANG00000016461	I	0.908
PPARG	Procavia capensis	ENSPCAG00000001034	I	0.908
ENSPSIG00000011100	Pelodiscus sinensis	ENSPSIG00000011100	I	0.908
PPARG	Pan troglodytes	ENSPTRG00000014632	I	0.908
Pparg	Rattus norvegicus	ENSRNOG00000008839	I	0.908
ENSSHAG00000008610	Sarcophilus harrisii	ENSSHAG00000008610	I	0.908
PPARG	Sus scrofa	ENSSSCG00000011579	I	0.908
ENSSTOG00000012778	Ictidomys tridecemlineatus	ENSSTOG00000012778	I	0.908
PPARG	Taeniopygia guttata	ENSTGUG00000004069	I	0.908
ENSTGUG00000015508	Taeniopygia guttata	ENSTGUG00000015508	I	0.908
PPARG	Tursiops truncatus	ENSTTRG00000016565	I	0.908
PPARG	Vicugna pacos	ENSVPAG00000011059	I	0.908
Aan_R011006	Calypte anna	Aan_R011006	I	0.908
Afo_R000410	Aptenodytes forsteri	Afo_R000410	I	0.908
Alligator_sinensis_CCG019615.1	Alligator sinensis	Alligator_sinensis_CCG019615.1	I	0.908
Brh_R006082	Buceros rhinoceros	Brh_R006082	I	0.908
Cmyd_10012195	Chelonia mydas	Cmyd_10012195	I	0.908
ENSBTAP00000041555-D1	Bos grunniens	ENSBTAP00000041555-D1	I	0.908
ENSP00000287820	Macaca fascicularis	ENSP00000287820	I	0.908
Gfo_R002038	Geospiza fortis	Gfo_R002038	I	0.908
Myotis_brandtii_PPARG_10028298	Myotis brandtii	Myotis_brandtii_PPARG_10028298	I	0.908
Ogr18683	Ophisaurus gracilis	Ogr18683	I	0.908
Pvit_12861	Pogona vitticeps	Pvit_12861	I	0.908
Tal_R008837	Tyto alba	Tal_R008837	I	0.908
CGI_10011509	Crassostrea gigas	CGI_10011509	I	0.907
ENSAMXG00000001073	Astyanax mexicanus	ENSAMXG00000001073	I	0.907
Ppard	Rattus norvegicus	ENSRNOG00000000503	I	0.905
SPU_021289	Strongylocentrotus purpuratus	SPU_021289	I	0.903
BXY_0926000	Bursaphelenchus xylophilus	BXY_0926000	I	0.902
ENSAMEG00000000689	Ailuropoda melanoleuca	ENSAMEG00000000689	I	0.901
ppar	Ciona intestinalis	ENSCING00000013188	I	0.901
PPARD	Pteropus vampyrus	ENSPVAG00000002761	I	0.901
PPARD	Bos taurus	ENSBTAG00000017542	I	0.899
PPARD	Canis familiaris	ENSCAFG00000001310	I	0.899
PPARD	Cavia porcellus	ENSCPOG00000011385	I	0.899
PPARD	Felis catus	ENSFCAG00000025234	I	0.899
ENSGMOG00000008225	Gadus morhua	ENSGMOG00000008225	I	0.899
ENSMPUG00000003549	Mustela putorius furo	ENSMPUG00000003549	I	0.899
Ppard	Mus musculus	ENSMUSG00000002250	I	0.899
ENSOARG00000011785	Ovis aries	ENSOARG00000011785	I	0.899
PPARD	Sus scrofa	ENSSSCG00000001539	I	0.899
ENSSTOG00000019649	Ictidomys tridecemlineatus	ENSSTOG00000019649	I	0.899
PPARD	Tursiops truncatus	ENSTTRG00000009416	I	0.899
ENSBTAP00000023319-D1	Bos grunniens	ENSBTAP00000023319-D1	I	0.899
PPARA	Ornithorhynchus anatinus	ENSOANG00000006277	I	0.898
ENSPSIG00000018221	Pelodiscus sinensis	ENSPSIG00000018221	I	0.898
SPU_028255	Strongylocentrotus purpuratus	SPU_028255	I	0.898
fgenesh2_pg.scaffold_12000186	Branchiostoma floridae	fgenesh2_pg.scaffold_12000186	I	0.898
gw.322.85.1	Branchiostoma floridae	gw.322.85.1	I	0.898
ppardb	Danio rerio	ENSDARG00000009473	I	0.897
ENSMEUG00000013000	Macropus eugenii	ENSMEUG00000013000	I	0.897
PPARD	Monodelphis domestica	ENSMODG00000013778	I	0.897
ENSSHAG00000010830	Sarcophilus harrisii	ENSSHAG00000010830	I	0.897
LOAG_16177	Loa loa	LOAG_16177	I	0.897
LOAG_17605	Loa loa	LOAG_17605	I	0.897
Bm4091	Brugia malayi	Bm4091	I	0.896
Bm5380	Brugia malayi	Bm5380	I	0.896
PPARD	Ochotona princeps	ENSOPRG00000015187	I	0.896
BTMF_0001157701	Brugia timori	BTMF_0001157701	I	0.896
L893_g17786	Steinernema glaseri	L893_g17786	I	0.896
PPARD	Anolis carolinensis	ENSACAG00000002228	I	0.895
ENSAMXG00000008963	Astyanax mexicanus	ENSAMXG00000008963	I	0.895
ENSAPLG00000004751	Anas platyrhynchos	ENSAPLG00000004751	I	0.895
PPARD	Callithrix jacchus	ENSCJAG00000015604	I	0.895
ENSCSAG00000009967	Chlorocebus sabaeus	ENSCSAG00000009967	I	0.895
PPARD	Dasypus novemcinctus	ENSDNOG00000038434	I	0.895
PPARD	Equus caballus	ENSECAG00000008227	I	0.895
ENSFALG00000003689	Ficedula albicollis	ENSFALG00000003689	I	0.895
PPARD	Homo sapiens	ENSG00000112033	D	0.895
PPARD	Gallus gallus	ENSGALG00000002588	I	0.895
PPARD	Loxodonta africana	ENSLAFG00000017670	I	0.895
ENSLOCG00000011628	Lepisosteus oculatus	ENSLOCG00000011628	I	0.895
PPARD	Meleagris gallopavo	ENSMGAG00000005631	I	0.895
PPARD	Microcebus murinus	ENSMICG00000000028	I	0.895
PPARD	Myotis lucifugus	ENSMLUG00000010594	I	0.895
PPARD	Macaca mulatta	ENSMMUG00000015904	I	0.895
ENSNLEG00000008621	Nomascus leucogenys	ENSNLEG00000008621	I	0.895
PPARD	Oryctolagus cuniculus	ENSOCUG00000007732	I	0.895
PPARD	Otolemur garnettii	ENSOGAG00000000630	I	0.895
ENSONIG00000011871	Oreochromis niloticus	ENSONIG00000011871	I	0.895
ppard	Oryzias latipes	ENSORLG00000006636	I	0.895
ENSPANG00000016477	Papio anubis	ENSPANG00000016477	I	0.895
PPARD	Procavia capensis	ENSPCAG00000010024	I	0.895
ENSPFOG00000013601	Poecilia formosa	ENSPFOG00000013601	I	0.895
ENSPPYG00000016527	Pongo abelii	ENSPPYG00000016527	I	0.895
PPARD	Pan troglodytes	ENSPTRG00000018082	I	0.895
PPARD	Taeniopygia guttata	ENSTGUG00000001735	I	0.895
ENSXMAG00000010449	Xiphophorus maculatus	ENSXMAG00000010449	I	0.895
Afo_R002094	Aptenodytes forsteri	Afo_R002094	I	0.895
Alligator_sinensis_CCG020458.1	Alligator sinensis	Alligator_sinensis_CCG020458.1	I	0.895
ENSP00000353916	Macaca fascicularis	ENSP00000353916	I	0.895
Pvit_06038	Pogona vitticeps	Pvit_06038	I	0.895
L596_g17227	Steinernema carpocapsae	L596_g17227	I	0.895
EFV55278	Trichinella spiralis	EFV55278	I	0.894
LOAG_16094	Loa loa	LOAG_16094	I	0.894
Sakowv30016840m.g	Saccoglossus kowalevskii	Sakowv30016840m.g	I	0.894
EEL_0000298701	Elaeophora elaphi	EEL_0000298701	I	0.894
HCOI01895500	Haemonchus contortus	HCOI01895500	I	0.894
HPLM_0000917101	Haemonchus placei	HPLM_0000917101	I	0.894
nAv.1.0.1.g06142	Acanthocheilonema viteae	nAv.1.0.1.g06142	I	0.894
nLs.2.1.2.g07781	Litomosoides sigmodontis	nLs.2.1.2.g07781	I	0.894
Sakowv30008100m.g	Saccoglossus kowalevskii	Sakowv30008100m.g	I	0.893
L898_g30372	Steinernema monticolum	L898_g30372	I	0.892
WBGene00237159	Onchocerca volvulus	WBGene00237159	I	0.890
WBGene00237163	Onchocerca volvulus	WBGene00237163	I	0.890
nDi.2.2.2.g09623	Dirofilaria immitis	nDi.2.2.2.g09623	I	0.890
ENSLACG00000010917	Latimeria chalumnae	ENSLACG00000010917	I	0.889
PPARA	Tupaia belangeri	ENSTBEG00000017305	I	0.889
HPBE_0001049901	Heligmosomoides bakeri	HPBE_0001049901	I	0.889
NBR_0000818301	Nippostrongylus brasiliensis	NBR_0000818301	I	0.889
ACAC_0000022201	Angiostrongylus cantonensis	ACAC_0000022201	I	0.888
ACOC_0000678401	Angiostrongylus costaricensis	ACOC_0000678401	I	0.888
DICVIV_00517	Dictyocaulus viviparus	DICVIV_00517	I	0.888
ENSAMXG00000007670	Astyanax mexicanus	ENSAMXG00000007670	I	0.887
ppardb	Gasterosteus aculeatus	ENSGACG00000008288	I	0.887
ENSLACG00000015749	Latimeria chalumnae	ENSLACG00000015749	I	0.887
ppardb	Tetraodon nigroviridis	ENSTNIG00000015112	I	0.887
ppard	Takifugu rubripes	ENSTRUG00000016146	I	0.887
SPU_017492	Strongylocentrotus purpuratus	SPU_017492	I	0.887
Myotis_brandtii_PPARD_10017768	Myotis brandtii	Myotis_brandtii_PPARD_10017768	I	0.887
L889_g22720	Steinernema feltiae	L889_g22720	I	0.887
PPARA	Meleagris gallopavo	ENSMGAG00000013838	I	0.886
ECANG7_08070	Echinococcus canadensis	ECANG7_08070	I	0.886
EmuJ_001013700	Echinococcus multilocularis	EmuJ_001013700	I	0.886
HDID_0000530301	Hymenolepis diminuta	HDID_0000530301	I	0.886
HmN_000080300	Hymenolepis microstoma	HmN_000080300	I	0.886
HNAJ_0000981901	Hymenolepis nana	HNAJ_0000981901	I	0.886
TsM_000276000	Taenia solium	TsM_000276000	I	0.886
Smp_000340	Schistosoma mansoni	Smp_000340	I	0.884
Sakowv30026939m.g	Saccoglossus kowalevskii	Sakowv30026939m.g	I	0.884
Sjc_0024820	Schistosoma japonicum	Sjc_0024820	I	0.884
A_00961	Schistosoma haematobium	A_00961	I	0.884
SSLN_0000812601	Schistocephalus solidus	SSLN_0000812601	I	0.884
T265_12785	Opisthorchis viverrini	T265_12785	I	0.884
PPARA	Monodelphis domestica	ENSMODG00000007365	I	0.883
ENSPFOG00000011712	Poecilia formosa	ENSPFOG00000011712	I	0.883
ENSSHAG00000002812	Sarcophilus harrisii	ENSSHAG00000002812	I	0.883
ENSXMAG00000004336	Xiphophorus maculatus	ENSXMAG00000004336	I	0.883
Alligator_sinensis_CCG021168.1	Alligator sinensis	Alligator_sinensis_CCG021168.1	I	0.883
Pvit_13332	Pogona vitticeps	Pvit_13332	I	0.883
ANCCAN_21154	Ancylostoma caninum	ANCCAN_21154	I	0.882
ANCDUO_09731	Ancylostoma duodenale	ANCDUO_09731	I	0.882
ANCDUO_24991	Ancylostoma duodenale	ANCDUO_24991	I	0.882
OESDEN_17917	Oesophagostomum dentatum	OESDEN_17917	I	0.882
Hba_04100	Heterorhabditis bacteriophora	Hba_04100	I	0.881
CpipJ_CPIJ016641	Culex pipiens	CpipJ_CPIJ016641	I	0.879
E78	Aedes aegypti	AAEL000327	I	0.879
ACYPI002307	Acyrthosiphon pisum	ACYPI002307	I	0.879
AGAP006571	Anopheles gambiae	AGAP006571	I	0.879
BGIBMGA003895	Bombyx mori	BGIBMGA003895	I	0.879
CapteG164614	Capitella teleta	CapteG164614	I	0.879
CGI_10004075	Crassostrea gigas	CGI_10004075	I	0.879
CPIJ016641	Culex quinquefasciatus	CPIJ016641	I	0.879
DAPPUDRAFT_8789	Daphnia pulex	DAPPUDRAFT_8789	I	0.879
PPARA	Anolis carolinensis	ENSACAG00000004788	I	0.879
ENSAPLG00000010641	Anas platyrhynchos	ENSAPLG00000010641	I	0.879
ENSFALG00000002852	Ficedula albicollis	ENSFALG00000002852	I	0.879
ENSGALG00000022985	Gallus gallus	ENSGALG00000022985	I	0.879
PPARA	Taeniopygia guttata	ENSTGUG00000011797	I	0.879
Eip78C	Drosophila melanogaster	FBgn0004865	D	0.879
GA14768	Drosophila pseudoobscura	FBgn0074795	I	0.879
GF24303	Drosophila ananassae	FBgn0101297	I	0.879
GG16168	Drosophila erecta	FBgn0108403	I	0.879
GH14972	Drosophila grimshawi	FBgn0122447	I	0.879
GI13134	Drosophila mojavensis	FBgn0135891	I	0.879
GL24671	Drosophila persimilis	FBgn0162259	I	0.879
GM22351	Drosophila sechellia	FBgn0177221	I	0.879
GD14944	Drosophila simulans	FBgn0186616	I	0.879
GJ13880	Drosophila virilis	FBgn0201099	I	0.879
GK16819	Drosophila willistoni	FBgn0218819	I	0.879
GE19737	Drosophila yakuba	FBgn0237070	I	0.879
HMEL017935	Heliconius melpomene	HMEL017935	I	0.879
KGM_08788	Danaus plexippus	KGM_08788	I	0.879
SMAR006046	Strigamia maritima	SMAR006046	I	0.879
tetur07g04810	Tetranychus urticae	tetur07g04810	I	0.879
Aan_R002660	Calypte anna	Aan_R002660	I	0.879
Afo_R011181	Aptenodytes forsteri	Afo_R011181	I	0.879
Brh_R000471	Buceros rhinoceros	Brh_R000471	I	0.879
Gfo_R000338	Geospiza fortis	Gfo_R000338	I	0.879
Ogr00970	Ophisaurus gracilis	Ogr00970	I	0.879
Tal_R005707	Tyto alba	Tal_R005707	I	0.879
Ocbimv22005391m.g	Octopus bimaculoides	Ocbimv22005391m.g	I	0.879
Ocbimv22031632m.g	Octopus bimaculoides	Ocbimv22031632m.g	I	0.879
LCUP006169	Lucilia cuprina	LCUP006169	I	0.879
AALB005254	Anopheles albimanus	AALB005254	I	0.879
AARA008449	Anopheles arabiensis	AARA008449	I	0.879
AATE000381	Anopheles atroparvus	AATE000381	I	0.879
ACOM039509	Anopheles coluzzii	ACOM039509	I	0.879
ACUA025330	Anopheles culicifacies	ACUA025330	I	0.879
AFAF020179	Anopheles farauti	AFAF020179	I	0.879
AMEC004804	Anopheles melas	AMEC004804	I	0.879
AMEM011289	Anopheles merus	AMEM011289	I	0.879
AQUA004679	Anopheles quadriannulatus	AQUA004679	I	0.879
ASIS013439	Anopheles sinensis	ASIS013439	I	0.879
LLOJ003472	Lutzomyia longipalpis	LLOJ003472	I	0.879
MDOA000386	Musca domestica	MDOA000386	I	0.879
CGOC_0000164901	Cylicostephanus goldi	CGOC_0000164901	I	0.879
SBAD_0001128101	Soboliphyme baturini	SBAD_0001128101	I	0.879
HelroG62045	Helobdella robusta	HelroG62045	I	0.878
NECAME_12149	Necator americanus	NECAME_12149	I	0.878
EFV58163	Trichinella spiralis	EFV58163	I	0.877
ENSONIG00000016715	Oreochromis niloticus	ENSONIG00000016715	I	0.877
LotgiG68173	Lottia gigantea	LotgiG68173	I	0.877
D917_00646	Trichinella nativa	D917_00646	I	0.877
nRc.2.0.1.g11663	Romanomermis culicivorax	nRc.2.0.1.g11663	I	0.877
TMUE_s0030002800	Trichuris muris	TMUE_s0030002800	I	0.877
CBN13485	Caenorhabditis brenneri	CBN13485	I	0.876
CJA05280	Caenorhabditis japonica	CJA05280	I	0.876
PPARA	Dasypus novemcinctus	ENSDNOG00000009243	I	0.876
PPARA	Felis catus	ENSFCAG00000005547	I	0.876
ENSMPUG00000016232	Mustela putorius furo	ENSMPUG00000016232	I	0.876
RORC	Pteropus vampyrus	ENSPVAG00000008917	I	0.876
Ppara	Rattus norvegicus	ENSRNOG00000021463	I	0.876
ENSSTOG00000010957	Ictidomys tridecemlineatus	ENSSTOG00000010957	I	0.876
sex-1	Caenorhabditis elegans	WBGene00004786	D	0.876
Myotis_brandtii_PPARA_10011681	Myotis brandtii	Myotis_brandtii_PPARA_10011681	I	0.876
BXY_0115900	Bursaphelenchus xylophilus	BXY_0115900	I	0.876
D918_09037	Trichuris suis	D918_09037	I	0.876
TMUE_s0156001400	Trichuris muris	TMUE_s0156001400	I	0.876
CBG17178	Caenorhabditis briggsae	CBG17178	D	0.875
CRE22690	Caenorhabditis remanei	CRE22690	I	0.875
E75	Aedes aegypti	AAEL007397	I	0.874
DAPPUDRAFT_205205	Daphnia pulex	DAPPUDRAFT_205205	I	0.874
PPARA	Bos taurus	ENSBTAG00000008063	I	0.874
PPARA	Callithrix jacchus	ENSCJAG00000000176	I	0.874
PPARA	Cavia porcellus	ENSCPOG00000001483	I	0.874
ENSCSAG00000005307	Chlorocebus sabaeus	ENSCSAG00000005307	I	0.874
Ppara	Dipodomys ordii	ENSDORG00000003547	I	0.874
PPARA	Equus caballus	ENSECAG00000000484	I	0.874
PPARA	Echinops telfairi	ENSETEG00000013610	I	0.874
PPARA	Homo sapiens	ENSG00000186951	D	0.874
PPARA	Gorilla gorilla	ENSGGOG00000011738	I	0.874
PPARA	Loxodonta africana	ENSLAFG00000013377	I	0.874
PPARA	Macaca mulatta	ENSMMUG00000016258	I	0.874
Ppara	Mus musculus	ENSMUSG00000022383	D	0.874
ENSNLEG00000015741	Nomascus leucogenys	ENSNLEG00000015741	I	0.874
ENSOARG00000019427	Ovis aries	ENSOARG00000019427	I	0.874
PPARA	Otolemur garnettii	ENSOGAG00000004830	I	0.874
ENSPANG00000017902	Papio anubis	ENSPANG00000017902	I	0.874
ENSPPYG00000011942	Pongo abelii	ENSPPYG00000011942	I	0.874
PPARA	Pan troglodytes	ENSPTRG00000014505	I	0.874
PPARA	Pteropus vampyrus	ENSPVAG00000010498	I	0.874
PPARA	Sus scrofa	ENSSSCG00000000006	I	0.874
ENSTSYG00000007368	Tarsius syrichta	ENSTSYG00000007368	I	0.874
Eip75B	Drosophila melanogaster	FBgn0000568	D	0.874
GD12358	Drosophila simulans	FBgn0184090	I	0.874
GK20573	Drosophila willistoni	FBgn0222569	I	0.874
ISCW000630	Ixodes scapularis	ISCW000630	I	0.874
KGM_07609	Danaus plexippus	KGM_07609	I	0.874
LotgiG162352	Lottia gigantea	LotgiG162352	I	0.874
SMAR002622	Strigamia maritima	SMAR002622	I	0.874
ENSBTAP00000010606-D1	Bos grunniens	ENSBTAP00000010606-D1	I	0.874
ENSP00000408149	Macaca fascicularis	ENSP00000408149	I	0.874
Hsal_04767--XP_393790.3_APIME	Harpegnathos saltator	Hsal_04767--XP_393790.3_APIME	I	0.874
CLEC025114	Cimex lectularius	CLEC025114	I	0.874
ppara.L	Xenopus laevis	XB-GENE-480233	I	0.874
BGLB010204	Biomphalaria glabrata	BGLB010204	I	0.874
MDOA007069	Musca domestica	MDOA007069	I	0.874
SMUV_0001106701	Syphacia muris	SMUV_0001106701	I	0.874
GPLIN_000228400	Globodera pallida	GPLIN_000228400	I	0.873
EVEC_0000729501	Enterobius vermicularis	EVEC_0000729501	I	0.872
CRE15620	Caenorhabditis remanei	CRE15620	I	0.871
PPARA	Gasterosteus aculeatus	ENSGACG00000018958	I	0.871
PPARA	Tetraodon nigroviridis	ENSTNIG00000009618	I	0.871
ppara2	Takifugu rubripes	ENSTRUG00000005904	I	0.871
ppara	Xenopus laevis	XB-GENE-480229	I	0.871
TELCIR_00096	Teladorsagia circumcincta	TELCIR_00096	I	0.871
RORC	Myotis lucifugus	ENSMLUG00000029229	I	0.870
RORC	Procavia capensis	ENSPCAG00000005628	I	0.870
ENSTSYG00000010455	Tarsius syrichta	ENSTSYG00000010455	I	0.870
Myotis_brandtii_RORC_10008053	Myotis brandtii	Myotis_brandtii_RORC_10008053	I	0.870
CJA14644	Caenorhabditis japonica	CJA14644	I	0.869
CGOC_0000088801	Cylicostephanus goldi	CGOC_0000088801	I	0.869
DICVIV_09548	Dictyocaulus viviparus	DICVIV_09548	I	0.869
HPBE_0001507701	Heligmosomoides bakeri	HPBE_0001507701	I	0.869
CGI_10028545	Crassostrea gigas	CGI_10028545	I	0.868
SNAPOd2T00027824001	Oikopleura dioica	SNAPOd2T00027824001	I	0.868
CBN05922	Caenorhabditis brenneri	CBN05922	I	0.867
HelroG90741	Helobdella robusta	HelroG90741	I	0.867
SMAR001127	Strigamia maritima	SMAR001127	I	0.867
tetur31g01930	Tetranychus urticae	tetur31g01930	I	0.867
nhr-85	Caenorhabditis elegans	WBGene00003675	I	0.867
e_gw.322.32.1	Branchiostoma floridae	e_gw.322.32.1	I	0.867
fgenesh2_pg.scaffold_12000187	Branchiostoma floridae	fgenesh2_pg.scaffold_12000187	I	0.867
Ocbimv22005201m.g	Octopus bimaculoides	Ocbimv22005201m.g	I	0.867
DAPPUDRAFT_219609	Daphnia pulex	DAPPUDRAFT_219609	I	0.865
usp	Drosophila melanogaster	FBgn0003964	D	0.865
GA18146	Drosophila pseudoobscura	FBgn0078154	I	0.865
GF21986	Drosophila ananassae	FBgn0098985	I	0.865
GG12659	Drosophila erecta	FBgn0104947	I	0.865
GH24408	Drosophila grimshawi	FBgn0131864	I	0.865
GI15428	Drosophila mojavensis	FBgn0138177	I	0.865
GL15129	Drosophila persimilis	FBgn0152733	I	0.865
GM18927	Drosophila sechellia	FBgn0173830	I	0.865
GJ16389	Drosophila virilis	FBgn0203573	I	0.865
GK25746	Drosophila willistoni	FBgn0227705	I	0.865
GE16988	Drosophila yakuba	FBgn0234474	I	0.865
HMEL005004	Heliconius melpomene	HMEL005004	I	0.865
ISCW005340	Ixodes scapularis	ISCW005340	I	0.865
KGM_05745	Danaus plexippus	KGM_05745	I	0.865
MCINX011950	Melitaea cinxia	MCINX011950	I	0.865
MESCA000610	Megaselia scalaris	MESCA000610	I	0.865
Smp_097700	Schistosoma mansoni	Smp_097700	I	0.865
LCUP004818	Lucilia cuprina	LCUP004818	I	0.865
Sjc_0026760	Schistosoma japonicum	Sjc_0026760	I	0.865
MDOA006432	Musca domestica	MDOA006432	I	0.865
A_02067	Schistosoma haematobium	A_02067	I	0.865
L889_g7283	Steinernema feltiae	L889_g7283	I	0.865
SMTD_0001086101	Schistosoma mattheei	SMTD_0001086101	I	0.865
EFV60819	Trichinella spiralis	EFV60819	I	0.864
WBGene00237160	Onchocerca volvulus	WBGene00237160	I	0.864
WBGene00237162	Onchocerca volvulus	WBGene00237162	I	0.864
estExt_fgenesh2_kg.C_120001	Branchiostoma floridae	estExt_fgenesh2_kg.C_120001	I	0.864
estExt_fgenesh2_pg.C_2760032	Branchiostoma floridae	estExt_fgenesh2_pg.C_2760032	I	0.864
BGLB008862	Biomphalaria glabrata	BGLB008862	I	0.864
D917_02601	Trichinella nativa	D917_02601	I	0.864
D918_08043	Trichuris suis	D918_08043	I	0.864
TMUE_s0189001000	Trichuris muris	TMUE_s0189001000	I	0.864
ENSPMAG00000004911	Petromyzon marinus	ENSPMAG00000004911	I	0.863
GB42692	Apis mellifera	GB42692	I	0.863
ASU_10228	Ascaris suum	ASU_10228	I	0.863
SMUV_0000987101	Syphacia muris	SMUV_0000987101	I	0.863
CpipJ_CPIJ016024	Culex pipiens	CpipJ_CPIJ016024	I	0.862
USP	Aedes aegypti	AAEL000395	I	0.862
ADAC008563	Anopheles darlingi	ADAC008563	I	0.862
USP	Anopheles gambiae	AGAP002095	I	0.862
CPIJ016024	Culex quinquefasciatus	CPIJ016024	I	0.862
ENSAMEG00000012299	Ailuropoda melanoleuca	ENSAMEG00000012299	I	0.862
RARG	Bos taurus	ENSBTAG00000007592	I	0.862
RARG	Canis familiaris	ENSCAFG00000007050	I	0.862
RARG	Callithrix jacchus	ENSCJAG00000018408	I	0.862
RARG	Cavia porcellus	ENSCPOG00000014819	I	0.862
ENSCSAG00000005525	Chlorocebus sabaeus	ENSCSAG00000005525	I	0.862
RARG	Equus caballus	ENSECAG00000016596	I	0.862
RARG	Erinaceus europaeus	ENSEEUG00000012904	I	0.862
RARG	Echinops telfairi	ENSETEG00000001526	I	0.862
RARG	Felis catus	ENSFCAG00000005870	I	0.862
RARG	Homo sapiens	ENSG00000172819	D	0.862
rarab	Gasterosteus aculeatus	ENSGACG00000005297	I	0.862
RARG	Gorilla gorilla	ENSGGOG00000003215	I	0.862
ENSLACG00000016217	Latimeria chalumnae	ENSLACG00000016217	I	0.862
ENSMEUG00000005385	Macropus eugenii	ENSMEUG00000005385	I	0.862
RARG	Macaca mulatta	ENSMMUG00000022017	I	0.862
ENSMPUG00000006113	Mustela putorius furo	ENSMPUG00000006113	I	0.862
Rarg	Mus musculus	ENSMUSG00000001288	D	0.862
ENSOARG00000016626	Ovis aries	ENSOARG00000016626	I	0.862
RARG	Oryctolagus cuniculus	ENSOCUG00000001432	I	0.862
RARG	Otolemur garnettii	ENSOGAG00000026655	I	0.862
ENSONIG00000006314	Oreochromis niloticus	ENSONIG00000006314	I	0.862
RARG	Ochotona princeps	ENSOPRG00000005114	I	0.862
ENSPANG00000022411	Papio anubis	ENSPANG00000022411	I	0.862
RARG	Procavia capensis	ENSPCAG00000012059	I	0.862
RARG	Pan troglodytes	ENSPTRG00000005007	I	0.862
RARG	Pteropus vampyrus	ENSPVAG00000009374	I	0.862
Rarg	Rattus norvegicus	ENSRNOG00000012499	I	0.862
ENSSHAG00000002378	Sarcophilus harrisii	ENSSHAG00000002378	I	0.862
RARG	Sus scrofa	ENSSSCG00000000258	I	0.862
ENSSTOG00000021101	Ictidomys tridecemlineatus	ENSSTOG00000021101	I	0.862
RARG	Tursiops truncatus	ENSTTRG00000002778	I	0.862
L798_09225	Zootermopsis nevadensis	L798_09225	I	0.862
LotgiG142734	Lottia gigantea	LotgiG142734	I	0.862

ENSCING00000002352 (Ciona intestinalis) Nuclear receptor

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2182 Related TFs

ENSCING00000002352 **(Ciona intestinalis)
Nuclear receptor**