CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PPARD
(
Sorex araneus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSSARG00000004033
T304733_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.451
1.000
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.451
1.000
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.451
1.000
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.451
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000003634
Nuclear receptor
27
56
MECRVCGDKASGFHYGVHACEGCKXXXXXX
Links
Other
Nuclear receptor
family TFs
Other
Sorex araneus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPARD
Choloepus hoffmanni
ENSCHOG00000008796
I
0.451
Ppard
Dipodomys ordii
ENSDORG00000009154
I
0.451
PPARD
Ochotona princeps
ENSOPRG00000015187
I
0.451
PPARD
Tupaia belangeri
ENSTBEG00000007973
I
0.451
ENSTSYG00000007342
Tarsius syrichta
ENSTSYG00000007342
I
0.451
PPARD
Vicugna pacos
ENSVPAG00000005876
I
0.451