CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA07854
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA07854
T305866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA07854
Nuclear receptor
4
77
SICLVCSSPTANSLHFGARTCKACAAFFRRTISMAMNYACTTEDPSMPCKIHYHLRMICRACRYEKCLRAGMKE
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold1397-EXSNAP2012.2
Pristionchus exspectatus
scaffold1397-EXSNAP2012.2
N
0.989
scaffold695-EXSNAP2012.2
Pristionchus exspectatus
scaffold695-EXSNAP2012.2
N
0.989
CJA16634
Caenorhabditis japonica
CJA16634
N
0.848
nhr-22
Caenorhabditis elegans
WBGene00003621
N
0.842
CBG02664
Caenorhabditis briggsae
CBG02664
N
0.832
CRE26280
Caenorhabditis remanei
CRE26280
N
0.832
CBN02452
Caenorhabditis brenneri
CBN02452
N
0.831