CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PPA13604
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA13604
T305888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA13604
Nuclear receptor
7
77
RLCLVCGGQSDSAHFGIDSCRACAAFFRRTVKLKKRYVCTQTTANCEIKKDNTWNCRSCRFNKCLAVGLLP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold806-EXSNAP2012.4
Pristionchus exspectatus
scaffold806-EXSNAP2012.4
N
0.916
scaffold861-EXSNAP2012.4
Pristionchus exspectatus
scaffold861-EXSNAP2012.4
N
0.855
scaffold1278-EXSNAP2012.5
Pristionchus exspectatus
scaffold1278-EXSNAP2012.5
N
0.845
scaffold119-EXSNAP2012.21
Pristionchus exspectatus
scaffold119-EXSNAP2012.21
N
0.836
PPA29361
Pristionchus pacificus
PPA29361
I
0.784
L892_g8146
Steinernema scapterisci
L892_g8146
N
0.770
SMUV_0000909301
Syphacia muris
SMUV_0000909301
I
0.768
L889_g16048
Steinernema feltiae
L889_g16048
N
0.766
L596_g24910
Steinernema carpocapsae
L596_g24910
N
0.760
EVEC_0001095701
Enterobius vermicularis
EVEC_0001095701
I
0.759
scaffold1235-EXSNAP2012.2
Pristionchus exspectatus
scaffold1235-EXSNAP2012.2
I
0.748