CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-271
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00011396
T306287_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T03E6.3
Nuclear receptor
1
66
MCIICGSTEAELHFGGISCRACAAFFRRYHFAKRSDILCTCKTRISSSHPCRKCRIEKCKEAGLTI
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE08638
Caenorhabditis remanei
CRE08638
N
0.889
CRE09074
Caenorhabditis remanei
CRE09074
N
0.888
nhr-139
Caenorhabditis elegans
WBGene00016365
N
0.884
CRE08644
Caenorhabditis remanei
CRE08644
N
0.847
CRE08639
Caenorhabditis remanei
CRE08639
N
0.821
CRE08641
Caenorhabditis remanei
CRE08641
N
0.821
CRE08643
Caenorhabditis remanei
CRE08643
N
0.819
CRE27296
Caenorhabditis remanei
CRE27296
N
0.815
CBG17072
Caenorhabditis briggsae
CBG17072
N
0.802
nhr-63
Caenorhabditis elegans
WBGene00003653
N
0.784
nhr-112
Caenorhabditis elegans
WBGene00003702
N
0.774
nhr-150
Caenorhabditis elegans
WBGene00007367
N
0.750