CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_12388
(
Dendroctonus ponderosae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
YQE_12388
T306440_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Eip78C
M06427_2.00
Drosophila melanogaster
RGGTCA
TGACCY
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
0.768
0.963
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN70988
Nuclear receptor
19
72
VPCKVCGDKASGRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCLAVGMSR
Links
Other
Nuclear receptor
family TFs
Other
Dendroctonus ponderosae
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ016641
Culex pipiens
CpipJ_CPIJ016641
I
0.768
E78
Aedes aegypti
AAEL000327
I
0.768
ACYPI002307
Acyrthosiphon pisum
ACYPI002307
I
0.768
AGAP006571
Anopheles gambiae
AGAP006571
I
0.768
CPIJ016641
Culex quinquefasciatus
CPIJ016641
I
0.768
DAPPUDRAFT_8789
Daphnia pulex
DAPPUDRAFT_8789
I
0.768
Eip78C
Drosophila melanogaster
FBgn0004865
D
0.768
GA14768
Drosophila pseudoobscura
FBgn0074795
I
0.768
GF24303
Drosophila ananassae
FBgn0101297
I
0.768
GG16168
Drosophila erecta
FBgn0108403
I
0.768
GH14972
Drosophila grimshawi
FBgn0122447
I
0.768
GI13134
Drosophila mojavensis
FBgn0135891
I
0.768
GL24671
Drosophila persimilis
FBgn0162259
I
0.768
GM22351
Drosophila sechellia
FBgn0177221
I
0.768
GD14944
Drosophila simulans
FBgn0186616
I
0.768
GJ13880
Drosophila virilis
FBgn0201099
I
0.768
GK16819
Drosophila willistoni
FBgn0218819
I
0.768
GE19737
Drosophila yakuba
FBgn0237070
I
0.768
SMAR006046
Strigamia maritima
SMAR006046
I
0.768
tetur07g04810
Tetranychus urticae
tetur07g04810
I
0.768
Ocbimv22031632m.g
Octopus bimaculoides
Ocbimv22031632m.g
I
0.768
LCUP006169
Lucilia cuprina
LCUP006169
I
0.768
AALB005254
Anopheles albimanus
AALB005254
I
0.768
AARA008449
Anopheles arabiensis
AARA008449
I
0.768
AATE000381
Anopheles atroparvus
AATE000381
I
0.768
ACOM039509
Anopheles coluzzii
ACOM039509
I
0.768
ACUA025330
Anopheles culicifacies
ACUA025330
I
0.768
AFAF020179
Anopheles farauti
AFAF020179
I
0.768
AMEC004804
Anopheles melas
AMEC004804
I
0.768
AMEM011289
Anopheles merus
AMEM011289
I
0.768
AQUA004679
Anopheles quadriannulatus
AQUA004679
I
0.768
ASIS013439
Anopheles sinensis
ASIS013439
I
0.768
MDOA000386
Musca domestica
MDOA000386
I
0.768
HDID_0000530301
Hymenolepis diminuta
HDID_0000530301
I
0.752
HmN_000080300
Hymenolepis microstoma
HmN_000080300
I
0.752
HNAJ_0000981901
Hymenolepis nana
HNAJ_0000981901
I
0.752
EFV58163
Trichinella spiralis
EFV58163
I
0.745
D917_00646
Trichinella nativa
D917_00646
I
0.745
nRc.2.0.1.g11663
Romanomermis culicivorax
nRc.2.0.1.g11663
I
0.745
TMUE_s0030002800
Trichuris muris
TMUE_s0030002800
I
0.745