YQE_12837 (Dendroctonus ponderosae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 YQE_12837 T306441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EcR
M06414_2.00 		Drosophila melanogaster
RAGGTCAW
WTGACCTY		 B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546 		0.891 0.862
NR1H4
M00368_2.00 		Homo sapiens
NVRGGTCANN
NNTGACCYBN		 PBM
Barrera et al.(2016)
NR1H4_REF 		0.805 0.815
NR1H4
M05876_2.00 		Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH		 SMiLE-seq
Isakova et al.(2017)
NR1H4 		0.805 0.815
NR1H4
M08152_2.00 		Homo sapiens
NNGGTCATTNN
NNAATGACCNN		 ChIP-seq
Mathelier et al.(2014)
MA1110.1 		0.805 0.815
NR1H4
M09263_2.00 		Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B 		0.805 0.815
Nr1h4
M09332_2.00 		Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A 		0.805 0.815
Nr1h4
M09618_2.00 		Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN		 Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al. 		0.805 0.815
NR1H4
M11086_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q2 		0.805 0.815
NR1H4
M11087_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q3 		0.805 0.815
NR1H4
M11088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q5 		0.805 0.815
NR1H4
M11089_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRRXR_Q5 		0.805 0.815
NR1H4
M00367_2.00 		Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN		 PBM
Barrera et al.(2016)
NR1H4_C144R 		0.805 0.800
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.766 0.815
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN70326 Nuclear receptor 41 105

Links

Other Nuclear receptor family TFs
Other Dendroctonus ponderosae TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAR011767 Strigamia maritima SMAR011767 I 0.926
L798_01568 Zootermopsis nevadensis L798_01568 I 0.926
NV11088 Nasonia vitripennis NV11088 I 0.926
RPRC014174 Rhodnius prolixus RPRC014174 I 0.926
ISCW003147 Ixodes scapularis ISCW003147 I 0.926
TC012112 Tribolium castaneum TC012112 I 0.926
tetur01g15140 Tetranychus urticae tetur01g15140 I 0.926
GB48059 Apis mellifera GB48059 I 0.926
ACYPI001692 Acyrthosiphon pisum ACYPI001692 I 0.926
DAPPUDRAFT_319648 Daphnia pulex DAPPUDRAFT_319648 I 0.924
PHUM467460 Pediculus humanus PHUM467460 I 0.919
LDEC009466 Leptinotarsa decemlineata LDEC009466 I 0.909
CLEC002129 Cimex lectularius CLEC002129 I 0.907
AARA003299 Anopheles arabiensis AARA003299 I 0.893
AALB010791 Anopheles albimanus AALB010791 I 0.893
CpipJ_CPIJ002963 Culex pipiens CpipJ_CPIJ002963 I 0.893
KGM_08219 Danaus plexippus KGM_08219 I 0.893
HMEL012265 Heliconius melpomene HMEL012265 I 0.893
AATE015478 Anopheles atroparvus AATE015478 I 0.893
LCUP007589 Lucilia cuprina LCUP007589 I 0.893
MDOA013387 Musca domestica MDOA013387 I 0.893
ASTEI02489 Anopheles stephensi ASTEI02489 I 0.893
CPIJ002963 Culex quinquefasciatus CPIJ002963 I 0.893
BGIBMGA006767 Bombyx mori BGIBMGA006767 I 0.893
ACOM026429 Anopheles coluzzii ACOM026429 I 0.893
PPAI003337 Phlebotomus papatasi PPAI003337 I 0.893
ECR Aedes aegypti AAEL009600 I 0.893
ADAC008672 Anopheles darlingi ADAC008672 I 0.893
AQUA002870 Anopheles quadriannulatus AQUA002870 I 0.893
AGAP012211 Anopheles gambiae AGAP012211 I 0.893
ACUA000806 Anopheles culicifacies ACUA000806 I 0.893
AMIN006955 Anopheles minimus AMIN006955 I 0.893
ADIR001886 Anopheles dirus ADIR001886 I 0.893
AEPI000843 Anopheles epiroticus AEPI000843 I 0.893
AMEM018998 Anopheles merus AMEM018998 I 0.893
AFAF021556 Anopheles farauti AFAF021556 I 0.893
AFUN015736 Anopheles funestus AFUN015736 I 0.893
GM16480 Drosophila sechellia FBgn0171395 I 0.891
GD10334 Drosophila simulans FBgn0182106 I 0.891
GL16258 Drosophila persimilis FBgn0153862 I 0.891
GF13818 Drosophila ananassae FBgn0090845 I 0.891
GE19426 Drosophila yakuba FBgn0236769 I 0.891
GA24101 Drosophila pseudoobscura FBgn0245500 I 0.891
EcR Drosophila melanogaster FBgn0000546 D 0.891
EcR Drosophila pseudoobscura FBgn0243551 I 0.891
GK21996 Drosophila willistoni FBgn0223981 I 0.891
GG10830 Drosophila erecta FBgn0103135 I 0.886
GI21285 Drosophila mojavensis FBgn0144015 I 0.878
GJ20887 Drosophila virilis FBgn0208023 I 0.878
GH20948 Drosophila grimshawi FBgn0128410 I 0.878
GPUH_0000103801 Gongylonema pulchrum GPUH_0000103801 I 0.853
TCLT_0000569201 Thelazia callipaeda TCLT_0000569201 I 0.852
ASU_11275 Ascaris suum ASU_11275 I 0.852
TCNE_0001577801 Toxocara canis TCNE_0001577801 I 0.852
nOo.2.0.1.g07306 Onchocerca ochengi nOo.2.0.1.g07306 I 0.850
BTMF_0001180601 Brugia timori BTMF_0001180601 I 0.850
nAv.1.0.1.g02667 Acanthocheilonema viteae nAv.1.0.1.g02667 I 0.850
nLs.2.1.2.g05295 Litomosoides sigmodontis nLs.2.1.2.g05295 I 0.850
DME_0000391501 Dracunculus medinensis DME_0000391501 I 0.850
EEL_0000192101 Elaeophora elaphi EEL_0000192101 I 0.850
WUBG_00356 Wuchereria bancrofti WUBG_00356 I 0.850
WBGene00245913 Onchocerca volvulus WBGene00245913 I 0.850
Bm2982 Brugia malayi Bm2982 I 0.850
LOAG_16842 Loa loa LOAG_16842 I 0.850
OFLC_0000511401 Onchocerca flexuosa OFLC_0000511401 I 0.850
e_gw.91.63.1 Branchiostoma floridae e_gw.91.63.1 I 0.836
e_gw.91.225.1 Branchiostoma floridae e_gw.91.225.1 I 0.836
L596_g17693 Steinernema carpocapsae L596_g17693 I 0.833
L892_g24092 Steinernema scapterisci L892_g24092 I 0.833
L898_g14201 Steinernema monticolum L898_g14201 I 0.833
L893_g6815 Steinernema glaseri L893_g6815 I 0.833
L889_g17804 Steinernema feltiae L889_g17804 I 0.831
nRc.2.0.1.g36086 Romanomermis culicivorax nRc.2.0.1.g36086 I 0.830
EFV58098 Trichinella spiralis EFV58098 I 0.821
D917_00700 Trichinella nativa D917_00700 I 0.821
D918_02615 Trichuris suis D918_02615 I 0.821
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.821
DICVIV_05958 Dictyocaulus viviparus DICVIV_05958 I 0.817
ENSOARG00000013901 Ovis aries ENSOARG00000013901 I 0.805
NR1H4 Felis catus ENSFCAG00000006469 I 0.805
ENSNLEG00000006093 Nomascus leucogenys ENSNLEG00000006093 I 0.805
NR1H4 Homo sapiens ENSG00000012504 D 0.805
NR1H4 Oryctolagus cuniculus ENSOCUG00000007177 I 0.805
ENSBTAP00000018079-D1 Bos grunniens ENSBTAP00000018079-D1 I 0.805
NR1H4 Choloepus hoffmanni ENSCHOG00000013215 I 0.805
NR1H4 Sorex araneus ENSSARG00000004689 I 0.805
Nr1h4 Mus musculus ENSMUSG00000047638 D 0.805
NR1H4 Dasypus novemcinctus ENSDNOG00000047912 I 0.805
ENSAMEG00000015232 Ailuropoda melanoleuca ENSAMEG00000015232 I 0.805
NR1H4 Bos taurus ENSBTAG00000013596 I 0.805
Nr1h4 Dipodomys ordii ENSDORG00000001224 I 0.805
ENSMPUG00000011573 Mustela putorius furo ENSMPUG00000011573 I 0.805
NR1H4 Gorilla gorilla ENSGGOG00000008137 I 0.805
NR1H4 Canis familiaris ENSCAFG00000006835 I 0.805
NR1H4 Equus caballus ENSECAG00000018166 I 0.805
NR1H4 Echinops telfairi ENSETEG00000019430 I 0.805
ENSP00000188403 Macaca fascicularis ENSP00000188403 I 0.805
NR1H4 Tupaia belangeri ENSTBEG00000016715 I 0.805
ENSPPYG00000004867 Pongo abelii ENSPPYG00000004867 I 0.805
ENSCSAG00000003451 Chlorocebus sabaeus ENSCSAG00000003451 I 0.805
NR1H4 Pan troglodytes ENSPTRG00000005345 I 0.805
ENSSTOG00000011771 Ictidomys tridecemlineatus ENSSTOG00000011771 I 0.805
NR1H4 Macaca mulatta ENSMMUG00000003571 I 0.805
NR1H4 Pteropus vampyrus ENSPVAG00000014680 I 0.805
NR1H4 Sus scrofa ENSSSCG00000000875 I 0.805
NR1H4 Otolemur garnettii ENSOGAG00000007874 I 0.805
NR1H4 Cavia porcellus ENSCPOG00000002168 I 0.805
NR1H4 Ochotona princeps ENSOPRG00000010997 I 0.805
NR1H4 Loxodonta africana ENSLAFG00000009154 I 0.805
NR1H4 Myotis lucifugus ENSMLUG00000009273 I 0.805
Myotis_brandtii_NR1H4_10025557 Myotis brandtii Myotis_brandtii_NR1H4_10025557 I 0.805
NR1H4 Callithrix jacchus ENSCJAG00000002087 I 0.805
ENSPANG00000023009 Papio anubis ENSPANG00000023009 I 0.805
NR1H4 Microcebus murinus ENSMICG00000013522 I 0.805
NR1H4 Tursiops truncatus ENSTTRG00000016373 I 0.805
NR1H4 Erinaceus europaeus ENSEEUG00000012218 I 0.802
CGI_10007606 Crassostrea gigas CGI_10007606 I 0.792
NBR_0001980401 Nippostrongylus brasiliensis NBR_0001980401 I 0.784
TELCIR_16351 Teladorsagia circumcincta TELCIR_16351 I 0.784
ANCCAN_11234 Ancylostoma caninum ANCCAN_11234 I 0.783
NECAME_11142 Necator americanus NECAME_11142 I 0.783
ACOC_0001278301 Angiostrongylus costaricensis ACOC_0001278301 I 0.782
HCOI00910600 Haemonchus contortus HCOI00910600 I 0.780
HCOI00433800 Haemonchus contortus HCOI00433800 I 0.780
Sakowv30016920m.g Saccoglossus kowalevskii Sakowv30016920m.g I 0.776
Sakowv30035171m.g Saccoglossus kowalevskii Sakowv30035171m.g I 0.776
Nr1h4 Rattus norvegicus ENSRNOG00000007197 I 0.772
ENSLACG00000018478 Latimeria chalumnae ENSLACG00000018478 I 0.770
LotgiG170342 Lottia gigantea LotgiG170342 I 0.769
ENSAMXG00000012228 Astyanax mexicanus ENSAMXG00000012228 I 0.767
ENSCAFG00000009671 Canis familiaris ENSCAFG00000009671 I 0.766
ENSAPLG00000008338 Anas platyrhynchos ENSAPLG00000008338 I 0.766
nr1h5.L Xenopus laevis XB-GENE-864860 I 0.766
nr1h5.S Xenopus laevis XB-GENE-6251607 D 0.766
ENSAMEG00000017106 Ailuropoda melanoleuca ENSAMEG00000017106 I 0.766
nr1h5 Xenopus tropicalis XB-GENE-486722 I 0.766
Aan_R010496 Calypte anna Aan_R010496 I 0.766
Nr1h5 Mus musculus ENSMUSG00000048938 I 0.766
ENSMODG00000004721 Monodelphis domestica ENSMODG00000004721 I 0.766
ENSFCAG00000028538 Felis catus ENSFCAG00000028538 I 0.766
ENSFALG00000003389 Ficedula albicollis ENSFALG00000003389 I 0.766
ENSECAG00000015617 Equus caballus ENSECAG00000015617 I 0.766
ENSTGUG00000000964 Taeniopygia guttata ENSTGUG00000000964 I 0.766
ENSSTOG00000027072 Ictidomys tridecemlineatus ENSSTOG00000027072 I 0.766
ENSOANG00000004519 Ornithorhynchus anatinus ENSOANG00000004519 I 0.766
ENSOGAG00000030317 Otolemur garnettii ENSOGAG00000030317 I 0.766
ENSMPUG00000005775 Mustela putorius furo ENSMPUG00000005775 I 0.766
ENSSHAG00000010518 Sarcophilus harrisii ENSSHAG00000010518 I 0.766
Afo_R001939 Aptenodytes forsteri Afo_R001939 I 0.766
ENSGALG00000002170 Gallus gallus ENSGALG00000002170 I 0.766
Gfo_R010069 Geospiza fortis Gfo_R010069 I 0.766
Brh_R011894 Buceros rhinoceros Brh_R011894 I 0.766
Alligator_sinensis_CCG004779.1 Alligator sinensis Alligator_sinensis_CCG004779.1 I 0.766
ENSLOCG00000010390 Lepisosteus oculatus ENSLOCG00000010390 I 0.765
Cmyd_10021697 Chelonia mydas Cmyd_10021697 I 0.763
ENSACAG00000003336 Anolis carolinensis ENSACAG00000003336 I 0.763
Pvit_15387 Pogona vitticeps Pvit_15387 I 0.763
Ogr07445 Ophisaurus gracilis Ogr07445 I 0.752
Cmyd_10004101 Chelonia mydas Cmyd_10004101 I 0.751
NR1H4 Taeniopygia guttata ENSTGUG00000008977 I 0.751
ENSSHAG00000012333 Sarcophilus harrisii ENSSHAG00000012333 I 0.751
ENSPFOG00000016166 Poecilia formosa ENSPFOG00000016166 I 0.751
ENSONIG00000014678 Oreochromis niloticus ENSONIG00000014678 I 0.751
ENSOCUG00000023188 Oryctolagus cuniculus ENSOCUG00000023188 I 0.751
nr1h4 Oryzias latipes ENSORLG00000011270 I 0.751
NR1H4 Monodelphis domestica ENSMODG00000004996 I 0.751
ENSPSIG00000005774 Pelodiscus sinensis ENSPSIG00000005774 I 0.751
Gfo_R005191 Geospiza fortis Gfo_R005191 I 0.751
NR1H4 Meleagris gallopavo ENSMGAG00000011690 I 0.751
ENSAPLG00000013289 Anas platyrhynchos ENSAPLG00000013289 I 0.751
ENSFALG00000011082 Ficedula albicollis ENSFALG00000011082 I 0.751
Afo_R012936 Aptenodytes forsteri Afo_R012936 I 0.751
nr1h4 Danio rerio ENSDARG00000057741 I 0.751
Aan_R006662 Calypte anna Aan_R006662 I 0.751
nr1h4 Gasterosteus aculeatus ENSGACG00000011745 I 0.751
Brh_R011463 Buceros rhinoceros Brh_R011463 I 0.751
ENSAMXG00000020274 Astyanax mexicanus ENSAMXG00000020274 I 0.751
ENSXMAG00000001433 Xiphophorus maculatus ENSXMAG00000001433 I 0.751
ENSMEUG00000009703 Macropus eugenii ENSMEUG00000009703 I 0.751
Tal_R013008 Tyto alba Tal_R013008 I 0.751
NR1H4 Gallus gallus ENSGALG00000011594 I 0.751
nr1h4 Takifugu rubripes ENSTRUG00000007314 I 0.751
ENSGMOG00000003773 Gadus morhua ENSGMOG00000003773 I 0.747
ENSLOCG00000015206 Lepisosteus oculatus ENSLOCG00000015206 I 0.747
nr1h4 Tetraodon nigroviridis ENSTNIG00000012144 I 0.746
ENSPSIG00000003828 Pelodiscus sinensis ENSPSIG00000003828 I 0.745