CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1530074
(
Branchiostoma floridae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
estExt_fgenesh2_pg.C_1530074
T306982_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1530074
Nuclear receptor
28
97
GNCLVCGEKASGFHYGVFSCESCKGFFRRSVHKGSVKVCKFGNRCCLNPSTKRSCADCRLRLCKAAGMRP
Links
Other
Nuclear receptor
family TFs
Other
Branchiostoma floridae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.636.10.1
Branchiostoma floridae
e_gw.636.10.1
I
0.824
estExt_fgenesh2_pg.C_1530073
Branchiostoma floridae
estExt_fgenesh2_pg.C_1530073
I
0.805
fgenesh2_pg.scaffold_153000072
Branchiostoma floridae
fgenesh2_pg.scaffold_153000072
I
0.805