CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0036610
(
Schistosoma japonicum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Sjc_0036610
T307159_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000003451
Nuclear receptor
406
477
QKCQVCGELAAGFHHGAYVCEACKKFFMRHSMADTKPTNVCPTGGNCVVAKGSRGKCQICRYRKCLLVGMKM
CPRT0000003451
Nuclear receptor
491
561
IPCRVCGGRSSGFHFGALTCEGCKGFFRRTEGSSNSLVCVGGQNTCTITPRSRNACKSCRFRRCLAAGMSK
Links
Other
Nuclear receptor
family TFs
Other
Schistosoma japonicum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
T265_13460
Opisthorchis viverrini
T265_13460
N
0.988
HNAJ_0001084401
Hymenolepis nana
HNAJ_0001084401
N
0.963
EmuJ_000379600
Echinococcus multilocularis
EmuJ_000379600
N
0.959
SMU15014375
Schmidtea mediterranea
SMU15014375
N
0.897
Smp_163790
Schistosoma mansoni
Smp_163790
N
0.766