CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc11248
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc11248
T307398_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc11248
Nuclear receptor
82
149
TDCVVCARPTKCCHFDVPSCLGCRSFFRRSVLNQRSYICKNNANCQIEKGELCRSCRFDRCLLSGMDF
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf01401-augustus-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf01401-augustus-gene-0.9
N
0.987
Minc00914
Meloidogyne incognita
Minc00914
N
0.983
Minc06609
Meloidogyne incognita
Minc06609
N
0.980
genemark-nMf.1.1.scaf00002-processed-gene-0.16
Meloidogyne floridensis
genemark-nMf.1.1.scaf00002-processed-gene-0.16
N
0.953
maker-nMf.1.1.scaf26558-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf26558-snap-gene-0.4
N
0.928