CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc17901
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc17901
T307439_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc17901
Nuclear receptor
6
77
NKCQVCDSSLKVSHQYNVNCCRVCAAFFKIYLKNKEQKFECKCLTAFGKIKLRLIDCEQCYLNKCLSVGMKG
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-nMf.1.1.scaf15898-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf15898-processed-gene-0.2
N
0.976
maker-nMf.1.1.scaf13190-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf13190-augustus-gene-0.3
N
0.959
Minc05571
Meloidogyne incognita
Minc05571
N
0.928
snap_masked-nMf.1.1.scaf07171-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf07171-processed-gene-0.2
N
0.928
augustus_masked-nMf.1.1.scaf15074-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15074-processed-gene-0.0
N
0.785