CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANCDUO_11035
(
Ancylostoma duodenale
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ANCDUO_11035
T308095_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.770
0.778
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCDUO_11035
Nuclear receptor
54
117
RKCAVCGDYPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFDKNCEVTKFVRPDREEVREKLR
Links
Other
Nuclear receptor
family TFs
Other
Ancylostoma duodenale
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_05105
Ancylostoma ceylanicum
ANCCEY_05105
I
0.897
TCNE_0001063401
Toxocara canis
TCNE_0001063401
N
0.873
L892_g21100
Steinernema scapterisci
L892_g21100
N
0.859
ANCCAN_03471
Ancylostoma caninum
ANCCAN_03471
I
0.849
TELCIR_07919
Teladorsagia circumcincta
TELCIR_07919
N
0.831
CBG06052
Caenorhabditis briggsae
CBG06052
I
0.770
nhr-7
Caenorhabditis elegans
WBGene00003606
D
0.770
CRE12779
Caenorhabditis remanei
CRE12779
I
0.755
HCOI00435200
Haemonchus contortus
HCOI00435200
I
0.748