CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_1189000
(
Bursaphelenchus xylophilus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
BXY_1189000
T308336_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-70
M00695_2.00
Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN
PBM
Narasimhan et al.(2015)
pTH9174
0.830
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_1189000.1
Nuclear receptor
30
99
GACRVCGAVANGIHFGIIACRACSAFFRRSVAEERIYKCLHDKKCEISSDIRNSCRSCRFTKCLAVGMKV
Links
Other
Nuclear receptor
family TFs
Other
Bursaphelenchus xylophilus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_1188900
Bursaphelenchus xylophilus
BXY_1188900
N
0.919
BXY_1188800
Bursaphelenchus xylophilus
BXY_1188800
N
0.859
CRE07801
Caenorhabditis remanei
CRE07801
I
0.853
nhr-70
Caenorhabditis elegans
WBGene00003660
D
0.830
BXY_1091200
Bursaphelenchus xylophilus
BXY_1091200
I
0.814
CBG20699
Caenorhabditis briggsae
CBG20699
I
0.806
L889_g10781
Steinernema feltiae
L889_g10781
I
0.785
SMUV_0000721901
Syphacia muris
SMUV_0000721901
I
0.745