CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001428001
(
Heligmosomoides bakeri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HPBE_0001428001
T308869_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001428001-mRNA-1
Nuclear receptor
1
51
VVCGDSADGFHYGVRSCRGCNAFFRRAITYDQQFICRRGGHCLVDRSQLFE
Links
Other
Nuclear receptor
family TFs
Other
Heligmosomoides bakeri
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000829501
Nippostrongylus brasiliensis
NBR_0000829501
N
0.870
ANCCEY_02206
Ancylostoma ceylanicum
ANCCEY_02206
N
0.859
ANCDUO_19443
Ancylostoma duodenale
ANCDUO_19443
N
0.859
NECAME_02646
Necator americanus
NECAME_02646
N
0.859
scaffold50-EXSNAP2012.1
Pristionchus exspectatus
scaffold50-EXSNAP2012.1
N
0.778
CBG05270
Caenorhabditis briggsae
CBG05270
N
0.776
CBN30611
Caenorhabditis brenneri
CBN30611
N
0.776
CJA10118
Caenorhabditis japonica
CJA10118
N
0.776
CRE19235
Caenorhabditis remanei
CRE19235
N
0.776
nhr-32
Caenorhabditis elegans
WBGene00003626
N
0.776
L596_g18686
Steinernema carpocapsae
L596_g18686
N
0.775
L892_g23809
Steinernema scapterisci
L892_g23809
N
0.762
TCLT_0000508901
Thelazia callipaeda
TCLT_0000508901
N
0.752