HPBE_0001512201 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0001512201 T308872_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tll
M02408_2.00 		Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN		 PBM
Weirauch et al.(2014)
pTH5714 		0.943 0.714
tll
M03932_2.00 		Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN		 SELEX
Nitta et al.(2015)
tll_1 		0.943 0.714
tll
M03933_2.00 		Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN		 SELEX
Nitta et al.(2015)
tll_2 		0.943 0.714
tll
M06558_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Mathelier et al.(2014)
MA0459.1 		0.943 0.714
tll
M06424_2.00 		Drosophila melanogaster
AAAGTYA
TRACTTT		 B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720 		0.943 0.714
tll
M06425_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720 		0.943 0.714
tll
M09688_2.00 		Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK		 Misc
Kulakovskiy et al.(2009)
tll 		0.943 0.714
tll
M11190_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TLL_Q6 		0.943 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001512201-mRNA-1 Nuclear receptor 15 92

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN02507 Caenorhabditis brenneri CBN02507 I 0.969
CBN17159 Caenorhabditis brenneri CBN17159 I 0.969
CBG06024 Caenorhabditis briggsae CBG06024 I 0.968
CRE12569 Caenorhabditis remanei CRE12569 I 0.968
L596_g15766 Steinernema carpocapsae L596_g15766 I 0.968
L889_g31911 Steinernema feltiae L889_g31911 I 0.968
L892_g15278 Steinernema scapterisci L892_g15278 I 0.968
L893_g4326 Steinernema glaseri L893_g4326 I 0.968
L898_g6157 Steinernema monticolum L898_g6157 I 0.968
SPAL_0001263800 Strongyloides papillosus SPAL_0001263800 I 0.965
SSTP_0000630700 Strongyloides stercoralis SSTP_0000630700 I 0.965
SVE_0117200 Strongyloides venezuelensis SVE_0117200 I 0.965
PTRK_0000518200 Parastrongyloides trichosuri PTRK_0000518200 I 0.964
Minc11620 Meloidogyne incognita Minc11620 I 0.960
Minc12749 Meloidogyne incognita Minc12749 I 0.960
Minc12751 Meloidogyne incognita Minc12751 I 0.960
genemark-nMf.1.1.scaf00299-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00299-processed-gene-0.6 I 0.960
GPLIN_000079400 Globodera pallida GPLIN_000079400 I 0.960
RSKR_0000792200 Rhabditophanes kr3021 RSKR_0000792200 I 0.960
nhr-67 Caenorhabditis elegans WBGene00003657 I 0.957
ACAC_0001268701 Angiostrongylus cantonensis ACAC_0001268701 I 0.956
ACOC_0000908001 Angiostrongylus costaricensis ACOC_0000908001 I 0.956
ANCCAN_24590 Ancylostoma caninum ANCCAN_24590 I 0.956
EVEC_0000945501 Enterobius vermicularis EVEC_0000945501 I 0.956
HCOI00499200 Haemonchus contortus HCOI00499200 I 0.956
HCOI00563400 Haemonchus contortus HCOI00563400 I 0.956
HPLM_0000273901 Haemonchus placei HPLM_0000273901 I 0.956
NBR_0002150401 Nippostrongylus brasiliensis NBR_0002150401 I 0.956
TELCIR_04430 Teladorsagia circumcincta TELCIR_04430 I 0.956
csin111366 Clonorchis sinensis csin111366 I 0.951
WUBG_10076 Wuchereria bancrofti WUBG_10076 I 0.946
Bm12516 Brugia malayi Bm12516 I 0.946
Bm2078 Brugia malayi Bm2078 I 0.946
WBGene00241769 Onchocerca volvulus WBGene00241769 I 0.946
SMU15014023 Schmidtea mediterranea SMU15014023 I 0.946
SMU15026844 Schmidtea mediterranea SMU15026844 I 0.946
SMU15032661 Schmidtea mediterranea SMU15032661 I 0.946
ALUE_0000403201 Ascaris lumbricoides ALUE_0000403201 I 0.946
ASU_07782 Ascaris suum ASU_07782 I 0.946
BTMF_0000437701 Brugia timori BTMF_0000437701 I 0.946
EEL_0000988401 Elaeophora elaphi EEL_0000988401 I 0.946
nAv.1.0.1.g01027 Acanthocheilonema viteae nAv.1.0.1.g01027 I 0.946
nDi.2.2.2.g02808 Dirofilaria immitis nDi.2.2.2.g02808 I 0.946
nOo.2.0.1.g00175 Onchocerca ochengi nOo.2.0.1.g00175 I 0.946
OFLC_0001242901 Onchocerca flexuosa OFLC_0001242901 I 0.946
TCLT_0000820901 Thelazia callipaeda TCLT_0000820901 I 0.946
TCNE_0000809801 Toxocara canis TCNE_0000809801 I 0.946
CGI_10028920 Crassostrea gigas CGI_10028920 I 0.944
DME_0000202701 Dracunculus medinensis DME_0000202701 I 0.944
tll Drosophila melanogaster FBgn0003720 D 0.943
tll Drosophila virilis FBgn0013145 I 0.943
GA12521 Drosophila pseudoobscura FBgn0072567 I 0.943
GF22927 Drosophila ananassae FBgn0099921 I 0.943
GG11781 Drosophila erecta FBgn0104076 I 0.943
GH14219 Drosophila grimshawi FBgn0121695 I 0.943
GI22125 Drosophila mojavensis FBgn0144854 I 0.943
GL13521 Drosophila persimilis FBgn0151126 I 0.943
GD21550 Drosophila simulans FBgn0192976 I 0.943
GK14159 Drosophila willistoni FBgn0216165 I 0.943
GE10907 Drosophila yakuba FBgn0228739 I 0.943
LCUP000197 Lucilia cuprina LCUP000197 I 0.943
MDOA000688 Musca domestica MDOA000688 I 0.943
LLOJ000605 Lutzomyia longipalpis LLOJ000605 I 0.942
HHAL007294-PA Halyomorpha halys HHAL007294-PA I 0.941
ISCW010891 Ixodes scapularis ISCW010891 I 0.940
CpipJ_CPIJ012467 Culex pipiens CpipJ_CPIJ012467 I 0.939
AAEL003020 Aedes aegypti AAEL003020 I 0.939
ADAC006907 Anopheles darlingi ADAC006907 I 0.939
AGAP000819 Anopheles gambiae AGAP000819 I 0.939
CPIJ012467 Culex quinquefasciatus CPIJ012467 I 0.939
LotgiG130367 Lottia gigantea LotgiG130367 I 0.939
RPRC007025 Rhodnius prolixus RPRC007025 I 0.939
Smp_155250 Schistosoma mansoni Smp_155250 I 0.939
AALB003284 Anopheles albimanus AALB003284 I 0.939
AARA002508 Anopheles arabiensis AARA002508 I 0.939
AATE006814 Anopheles atroparvus AATE006814 I 0.939
ACOM036097 Anopheles coluzzii ACOM036097 I 0.939
ACUA015273 Anopheles culicifacies ACUA015273 I 0.939
AEPI011017 Anopheles epiroticus AEPI011017 I 0.939
AFAF018214 Anopheles farauti AFAF018214 I 0.939
AFUN007550 Anopheles funestus AFUN007550 I 0.939
AMAM000431 Anopheles maculatus AMAM000431 I 0.939
AMEC019536 Anopheles melas AMEC019536 I 0.939
AMEM005434 Anopheles merus AMEM005434 I 0.939
AMIN005547 Anopheles minimus AMIN005547 I 0.939
AQUA002816 Anopheles quadriannulatus AQUA002816 I 0.939
ASIS014807 Anopheles sinensis ASIS014807 I 0.939
ASTEI01071 Anopheles stephensi ASTEI01071 I 0.939
TRE_0001185401 Trichobilharzia regenti TRE_0001185401 I 0.939
CapteG226190 Capitella teleta CapteG226190 I 0.938
DAPPUDRAFT_299738 Daphnia pulex DAPPUDRAFT_299738 I 0.936
ADIR001527 Anopheles dirus ADIR001527 I 0.936
HDID_0000867201 Hymenolepis diminuta HDID_0000867201 I 0.936
HmN_000489600 Hymenolepis microstoma HmN_000489600 I 0.936
HNAJ_0000904901 Hymenolepis nana HNAJ_0000904901 I 0.936
TTAC_0000853401 Hydatigera taeniaeformis TTAC_0000853401 I 0.936
CGI_10028921 Crassostrea gigas CGI_10028921 I 0.933
tetur08g01210 Tetranychus urticae tetur08g01210 I 0.932
PHUM331460 Pediculus humanus PHUM331460 I 0.930
SMAR006008 Strigamia maritima SMAR006008 I 0.930
EFV59616 Trichinella spiralis EFV59616 I 0.927
D917_09121 Trichinella nativa D917_09121 I 0.927
CLEC004804 Cimex lectularius CLEC004804 I 0.922
GB50436 Apis mellifera GB50436 I 0.921
Cflo_06716--XP_001121187.1_APIME Camponotus floridanus Cflo_06716--XP_001121187.1_APIME I 0.921
Hsal_06558--XP_001121187.1_APIME Harpegnathos saltator Hsal_06558--XP_001121187.1_APIME I 0.921
D918_06154 Trichuris suis D918_06154 I 0.919
TTRE_0000057901 Trichuris trichiura TTRE_0000057901 I 0.919
TMUE_s0114001400 Trichuris muris TMUE_s0114001400 I 0.917
HelroG71774 Helobdella robusta HelroG71774 I 0.913
KGM_21528 Danaus plexippus KGM_21528 I 0.913
BGIBMGA002000 Bombyx mori BGIBMGA002000 I 0.912
HMEL012854 Heliconius melpomene HMEL012854 I 0.912
nRc.2.0.1.g16033 Romanomermis culicivorax nRc.2.0.1.g16033 I 0.901
BXY_0039800 Bursaphelenchus xylophilus BXY_0039800 I 0.900
SSLN_0001329801 Schistocephalus solidus SSLN_0001329801 I 0.897
ECANG7_04037 Echinococcus canadensis ECANG7_04037 I 0.886
TASK_0000491201 Taenia asiatica TASK_0000491201 I 0.886
TsM_000278500 Taenia solium TsM_000278500 I 0.886
ACYPI009360 Acyrthosiphon pisum ACYPI009360 I 0.867
YQE_11038 Dendroctonus ponderosae YQE_11038 I 0.841
PPAI002209 Phlebotomus papatasi PPAI002209 I 0.831
nDi.2.2.2.g02413 Dirofilaria immitis nDi.2.2.2.g02413 I 0.829
HelroG194580 Helobdella robusta HelroG194580 I 0.815
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.804
TC000441 Tribolium castaneum TC000441 I 0.786
e_gw.42.96.1 Branchiostoma floridae e_gw.42.96.1 I 0.763
gw.42.188.1 Branchiostoma floridae gw.42.188.1 I 0.763
LDEC005682 Leptinotarsa decemlineata LDEC005682 I 0.760
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I 0.756