L892_g30030 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g30030 T309274_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.746 0.543
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.746 0.543
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.746 0.543
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.746 0.543
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.746 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g30030.t1 Nuclear receptor 32 102

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g328 Steinernema carpocapsae L596_g328 I 0.996
L898_g34078 Steinernema monticolum L898_g34078 I 0.993
CBN09702 Caenorhabditis brenneri CBN09702 I 0.861
nhr-91 Caenorhabditis elegans WBGene00003681 I 0.861
CBG07680 Caenorhabditis briggsae CBG07680 I 0.858
CRE15343 Caenorhabditis remanei CRE15343 I 0.855
TCLT_0000586001 Thelazia callipaeda TCLT_0000586001 I 0.794
SMU15036881 Schmidtea mediterranea SMU15036881 I 0.790
SMUV_0000490601 Syphacia muris SMUV_0000490601 I 0.788
LotgiG120003 Lottia gigantea LotgiG120003 I 0.787
Ocbimv22018322m.g Octopus bimaculoides Ocbimv22018322m.g I 0.784
CJA15590 Caenorhabditis japonica CJA15590 I 0.783
PHUM195250 Pediculus humanus PHUM195250 I 0.778
ACYPI008092 Acyrthosiphon pisum ACYPI008092 I 0.774
snap_masked-nMf.1.1.scaf00912-processed-gene-0.11 Meloidogyne floridensis snap_masked-nMf.1.1.scaf00912-processed-gene-0.11 I 0.773
RORC Felis catus ENSFCAG00000018105 I 0.770
NEMVEDRAFT_v1g134436 Nematostella vectensis NEMVEDRAFT_v1g134436 I 0.770
nr6a1.S Xenopus laevis XB-GENE-487596 I 0.770
SPER_0000365501 Spirometra erinaceieuropaei SPER_0000365501 I 0.766
SSLN_0001966501 Schistocephalus solidus SSLN_0001966501 I 0.766
SNAPOd2T00007449001 Oikopleura dioica SNAPOd2T00007449001 I 0.764
Ppa-nhr-23 Pristionchus pacificus PPA24741 I 0.763
SNAPOd2T00011859001 Oikopleura dioica SNAPOd2T00011859001 I 0.763
SPER_0002698501 Spirometra erinaceieuropaei SPER_0002698501 I 0.761
tetur07g00140 Tetranychus urticae tetur07g00140 I 0.754
rarab Gasterosteus aculeatus ENSGACG00000005297 I 0.753
ENSONIG00000006314 Oreochromis niloticus ENSONIG00000006314 I 0.753
RARA Takifugu rubripes ENSTRUG00000010442 I 0.753
ENSFALG00000004358 Ficedula albicollis ENSFALG00000004358 I 0.752
RARG Taeniopygia guttata ENSTGUG00000003804 I 0.752
SPU_000749 Strongylocentrotus purpuratus SPU_000749 I 0.750
GPLIN_000153900 Globodera pallida GPLIN_000153900 I 0.747
DAPPUDRAFT_203579 Daphnia pulex DAPPUDRAFT_203579 I 0.746
NR6A1 Anolis carolinensis ENSACAG00000006870 I 0.746
ENSAMEG00000011212 Ailuropoda melanoleuca ENSAMEG00000011212 I 0.746
ENSAPLG00000004548 Anas platyrhynchos ENSAPLG00000004548 I 0.746
NR6A1 Bos taurus ENSBTAG00000040585 I 0.746
NR6A1 Canis familiaris ENSCAFG00000020216 I 0.746
gcnf Ciona intestinalis ENSCING00000005163 I 0.746
NR6A1 Callithrix jacchus ENSCJAG00000006631 I 0.746
NR6A1 Cavia porcellus ENSCPOG00000005970 I 0.746
ENSCSAVG00000002688 Ciona savignyi ENSCSAVG00000002688 I 0.746
nr6a1a Danio rerio ENSDARG00000101508 I 0.746
NR6A1 Dasypus novemcinctus ENSDNOG00000017832 I 0.746
NR6A1 Equus caballus ENSECAG00000021324 I 0.746
NR6A1 Echinops telfairi ENSETEG00000012014 I 0.746
ENSFALG00000002133 Ficedula albicollis ENSFALG00000002133 I 0.746
NR6A1 Felis catus ENSFCAG00000005507 I 0.746
NR6A1 Homo sapiens ENSG00000148200 D 0.746
nr6a1a Gasterosteus aculeatus ENSGACG00000003560 I 0.746
NR6A1 Gallus gallus ENSGALG00000001073 I 0.746
NR6A1 Gorilla gorilla ENSGGOG00000009250 I 0.746
ENSGMOG00000008794 Gadus morhua ENSGMOG00000008794 I 0.746
ENSLACG00000018630 Latimeria chalumnae ENSLACG00000018630 I 0.746
NR6A1 Loxodonta africana ENSLAFG00000011676 I 0.746
ENSLOCG00000005138 Lepisosteus oculatus ENSLOCG00000005138 I 0.746
ENSMEUG00000013509 Macropus eugenii ENSMEUG00000013509 I 0.746
NR5A1 Meleagris gallopavo ENSMGAG00000008342 I 0.746
NR6A1 Microcebus murinus ENSMICG00000002911 I 0.746
NR6A1 Myotis lucifugus ENSMLUG00000014714 I 0.746
NR6A1 Macaca mulatta ENSMMUG00000011185 I 0.746
NR6A1 Monodelphis domestica ENSMODG00000019748 I 0.746
ENSMPUG00000013965 Mustela putorius furo ENSMPUG00000013965 I 0.746
Nr6a1 Mus musculus ENSMUSG00000063972 I 0.746
ENSNLEG00000017287 Nomascus leucogenys ENSNLEG00000017287 I 0.746
ENSOARG00000013368 Ovis aries ENSOARG00000013368 I 0.746
NR6A1 Oryctolagus cuniculus ENSOCUG00000007599 I 0.746
NR6A1 Otolemur garnettii ENSOGAG00000030677 I 0.746
ENSONIG00000020217 Oreochromis niloticus ENSONIG00000020217 I 0.746
NR6A1 Ochotona princeps ENSOPRG00000016686 I 0.746
ENSORLG00000016492 Oryzias latipes ENSORLG00000016492 I 0.746
ENSPANG00000025861 Papio anubis ENSPANG00000025861 I 0.746
ENSPFOG00000005783 Poecilia formosa ENSPFOG00000005783 I 0.746
ENSPPYG00000019600 Pongo abelii ENSPPYG00000019600 I 0.746
ENSPSIG00000006445 Pelodiscus sinensis ENSPSIG00000006445 I 0.746
NR6A1 Pan troglodytes ENSPTRG00000021357 I 0.746
Nr6a1 Rattus norvegicus ENSRNOG00000013232 I 0.746
ENSSHAG00000016733 Sarcophilus harrisii ENSSHAG00000016733 I 0.746
ENSSSCG00000023876 Sus scrofa ENSSSCG00000023876 I 0.746
ENSSTOG00000022764 Ictidomys tridecemlineatus ENSSTOG00000022764 I 0.746
NR6A1 Tupaia belangeri ENSTBEG00000007008 I 0.746
NR5A1 Taeniopygia guttata ENSTGUG00000007170 I 0.746
nr6a1a Tetraodon nigroviridis ENSTNIG00000010587 I 0.746
nr6a1a Takifugu rubripes ENSTRUG00000006306 I 0.746
ENSTSYG00000004262 Tarsius syrichta ENSTSYG00000004262 I 0.746
NR6A1 Tursiops truncatus ENSTTRG00000017391 I 0.746
ENSXMAG00000009061 Xiphophorus maculatus ENSXMAG00000009061 I 0.746
ISCW023325 Ixodes scapularis ISCW023325 I 0.746
Aan_R009393 Calypte anna Aan_R009393 I 0.746
Afo_R013752 Aptenodytes forsteri Afo_R013752 I 0.746
Cmyd_10020219 Chelonia mydas Cmyd_10020219 I 0.746
ENSBTAP00000051129-D1 Bos grunniens ENSBTAP00000051129-D1 I 0.746
ENSP00000420267 Macaca fascicularis ENSP00000420267 I 0.746
Gfo_R007909 Geospiza fortis Gfo_R007909 I 0.746
Myotis_brandtii_NR6A1_10025096 Myotis brandtii Myotis_brandtii_NR6A1_10025096 I 0.746
Pvit_08519 Pogona vitticeps Pvit_08519 I 0.746
nr6a1 Xenopus tropicalis XB-GENE-487592 I 0.746
WUBG_05781 Wuchereria bancrofti WUBG_05781 I 0.745
Bm6190 Brugia malayi Bm6190 I 0.745
Bm8373 Brugia malayi Bm8373 I 0.745
Bm8375 Brugia malayi Bm8375 I 0.745
LOAG_01750 Loa loa LOAG_01750 I 0.745
WBGene00237636 Onchocerca volvulus WBGene00237636 I 0.745
BTMF_0001258101 Brugia timori BTMF_0001258101 I 0.745
nAv.1.0.1.g05520 Acanthocheilonema viteae nAv.1.0.1.g05520 I 0.745
nDi.2.2.2.g04428 Dirofilaria immitis nDi.2.2.2.g04428 I 0.745
OFLC_0001415101 Onchocerca flexuosa OFLC_0001415101 I 0.745