CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf00098-augustus-gene-0.15
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf00098-augustus-gene-0.15
T309545_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00098-augustus-gene-0.15-mRNA-1
Nuclear receptor
6
81
AKCLVCGARNAKQHYGSWCCNGCKGFFWRTISCRRNYICLNFNNNSVFVKCEIEHGRRNSCRACRLERCLKVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15059
Meloidogyne incognita
Minc15059
N
0.994
MhA1_Contig280.frz3.gene31
Meloidogyne hapla
MhA1_Contig280.frz3.gene31
N
0.908
BXY_0412900
Bursaphelenchus xylophilus
BXY_0412900
I
0.872
L892_g24140
Steinernema scapterisci
L892_g24140
N
0.790
L596_g25921
Steinernema carpocapsae
L596_g25921
N
0.786
CRE07035
Caenorhabditis remanei
CRE07035
I
0.784
CBG14996
Caenorhabditis briggsae
CBG14996
I
0.766
L898_g16530
Steinernema monticolum
L898_g16530
N
0.765
CRE07034
Caenorhabditis remanei
CRE07034
I
0.754
GPLIN_000452800
Globodera pallida
GPLIN_000452800
N
0.748